Gene : Glyma.09G198900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF60 - NUCLEOPORIN-RELATED Genomic Order:  1989
Name:  ? Glyma.09G198900 Secondary Identifier:  ? PAC:30486269
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G198900 0.5kb upstream 0.5kb upstream 1481 true Chr09: 42326706-42328186 Glycine max
Glyma.09G198900 0.5kb upstream 0.5kb upstream 500 false Chr09: 42326706-42327205 Glycine max
Glyma.09G198900 0.5kb downstream 0.5kb downstream 1481 true Chr09: 42327206-42328686 Glycine max
Glyma.09G198900 0.5kb downstream 0.5kb downstream 500 false Chr09: 42328187-42328686 Glycine max
Glyma.09G198900 1.0kb upstream 1.0kb upstream 1981 true Chr09: 42326206-42328186 Glycine max
Glyma.09G198900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 42326206-42327205 Glycine max
Glyma.09G198900 1.0kb downstream 1.0kb downstream 1981 true Chr09: 42327206-42329186 Glycine max
Glyma.09G198900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 42328187-42329186 Glycine max
Glyma.09G198900 2.0kb upstream 2.0kb upstream 2981 true Chr09: 42325206-42328186 Glycine max
Glyma.09G198900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 42325206-42327205 Glycine max
Glyma.09G198900 2.0kb downstream 2.0kb downstream 2981 true Chr09: 42327206-42330186 Glycine max
Glyma.09G198900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 42328187-42330186 Glycine max
Glyma.09G198900 5.0kb upstream 5.0kb upstream 5981 true Chr09: 42322206-42328186 Glycine max
Glyma.09G198900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 42322206-42327205 Glycine max
Glyma.09G198900 5.0kb downstream 5.0kb downstream 5981 true Chr09: 42327206-42333186 Glycine max
Glyma.09G198900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 42328187-42333186 Glycine max
Glyma.09G198900 10.0kb upstream 10.0kb upstream 10981 true Chr09: 42317206-42328186 Glycine max
Glyma.09G198900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 42317206-42327205 Glycine max
Glyma.09G198900 10.0kb downstream 10.0kb downstream 10981 true Chr09: 42327206-42338186 Glycine max
Glyma.09G198900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 42328187-42338186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304819 5265 Fabidae View MSA
124070983 5270 Rosid View MSA
123743012 5271 Pentapetalae View MSA
122793974 5272 Eudicot View MSA
122048148 5273 Angiosperm View MSA
121310864 5274 Embryophyte View MSA
123348248 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.6452 0.0 194.683 High High
cufflinks 7.45262 0.0 22.773    
cufflinks 23.1932 0.0 62.7288 High  
cufflinks 4.56504 0.0 14.9131    
cufflinks 7.49424 0.0 22.8686    
cufflinks 2.4497 0.0 8.58289    
cufflinks 0.305673 0.0 1.19557   Low
cufflinks 8.80624 0.0 26.2028    
cufflinks 3.43761 0.0 11.6506    
cufflinks 8.822     High  
cufflinks 2.988        
cufflinks 19.03     High  
cufflinks 1.435       Low
cufflinks 0.457       Low
cufflinks 3.589        
cufflinks 12.804     High  
cufflinks 35.801     High High
cufflinks 10.076     High  
cufflinks 16.422     High  
cufflinks 3.928        
cufflinks 5.543        
cufflinks 23.224     High  
cufflinks 26.831     High High
cufflinks 13.26     High  
cufflinks 7.256     High  
cufflinks 15.535     High  

0 Strain