Gene : Glyma.09G157700 G. max Wm82.a2.v1
Defline:  (1 of 2) PF10340 - Protein of unknown function (DUF2424) (DUF2424) Genomic Order:  1577
Name:  ? Glyma.09G157700 Secondary Identifier:  ? PAC:30485658
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6303 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G157700 0.5kb upstream 0.5kb upstream 2102 true Chr09: 38095923-38098024 Glycine max
Glyma.09G157700 0.5kb upstream 0.5kb upstream 500 false Chr09: 38095923-38096422 Glycine max
Glyma.09G157700 0.5kb downstream 0.5kb downstream 2102 true Chr09: 38096423-38098524 Glycine max
Glyma.09G157700 0.5kb downstream 0.5kb downstream 500 false Chr09: 38098025-38098524 Glycine max
Glyma.09G157700 1.0kb upstream 1.0kb upstream 2602 true Chr09: 38095423-38098024 Glycine max
Glyma.09G157700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38095423-38096422 Glycine max
Glyma.09G157700 1.0kb downstream 1.0kb downstream 2602 true Chr09: 38096423-38099024 Glycine max
Glyma.09G157700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38098025-38099024 Glycine max
Glyma.09G157700 2.0kb upstream 2.0kb upstream 3602 true Chr09: 38094423-38098024 Glycine max
Glyma.09G157700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38094423-38096422 Glycine max
Glyma.09G157700 2.0kb downstream 2.0kb downstream 3602 true Chr09: 38096423-38100024 Glycine max
Glyma.09G157700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38098025-38100024 Glycine max
Glyma.09G157700 5.0kb upstream 5.0kb upstream 6602 true Chr09: 38091423-38098024 Glycine max
Glyma.09G157700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38091423-38096422 Glycine max
Glyma.09G157700 5.0kb downstream 5.0kb downstream 6602 true Chr09: 38096423-38103024 Glycine max
Glyma.09G157700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38098025-38103024 Glycine max
Glyma.09G157700 10.0kb upstream 10.0kb upstream 11602 true Chr09: 38086423-38098024 Glycine max
Glyma.09G157700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38086423-38096422 Glycine max
Glyma.09G157700 10.0kb downstream 10.0kb downstream 11602 true Chr09: 38096423-38108024 Glycine max
Glyma.09G157700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38098025-38108024 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617785 5273 Angiosperm View MSA
122254121 5265 Fabidae View MSA
123996428 5270 Rosid View MSA
123570903 5271 Pentapetalae View MSA
122605636 5272 Eudicot View MSA
120889921 5274 Embryophyte View MSA
122930628 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.9368 0.0 27.7317   High
cufflinks 2.7006 0.0 8.97911    
cufflinks 3.31178 0.0 10.785    
cufflinks 5.0844 0.0 15.4856    
cufflinks 1.4261 0.0 5.02659    
cufflinks 1.18459 0.0 4.24094   Low
cufflinks 3.98151 0.0 12.4863    
cufflinks 2.8799 0.0 9.50142    
cufflinks 1.23629 0.0 4.417   Low
cufflinks 1.348        
cufflinks 0.057       Low
cufflinks 2.023        
cufflinks 0.528        
cufflinks 0.356        
cufflinks 0.217        
cufflinks 2.994        
cufflinks 0.257        
cufflinks 1.797        
cufflinks 1.53        
cufflinks 2.768        
cufflinks 0.107       Low
cufflinks 3.723       High
cufflinks 3.963       High
cufflinks 0.071       Low
cufflinks 2.515        
cufflinks 0.063     Low Low

0 Strain