Gene : Glyma.09G167500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13734//PTHR13734:SF42 - TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBER Genomic Order:  1675
Name:  ? Glyma.09G167500 Secondary Identifier:  ? PAC:30482799
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G167500 0.5kb upstream 0.5kb upstream 4727 true Chr09: 39174197-39178923 Glycine max
Glyma.09G167500 0.5kb upstream 0.5kb upstream 500 false Chr09: 39178424-39178923 Glycine max
Glyma.09G167500 0.5kb downstream 0.5kb downstream 4727 true Chr09: 39173697-39178423 Glycine max
Glyma.09G167500 0.5kb downstream 0.5kb downstream 500 false Chr09: 39173697-39174196 Glycine max
Glyma.09G167500 1.0kb upstream 1.0kb upstream 5227 true Chr09: 39174197-39179423 Glycine max
Glyma.09G167500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39178424-39179423 Glycine max
Glyma.09G167500 1.0kb downstream 1.0kb downstream 5227 true Chr09: 39173197-39178423 Glycine max
Glyma.09G167500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39173197-39174196 Glycine max
Glyma.09G167500 2.0kb upstream 2.0kb upstream 6227 true Chr09: 39174197-39180423 Glycine max
Glyma.09G167500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39178424-39180423 Glycine max
Glyma.09G167500 2.0kb downstream 2.0kb downstream 6227 true Chr09: 39172197-39178423 Glycine max
Glyma.09G167500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39172197-39174196 Glycine max
Glyma.09G167500 5.0kb upstream 5.0kb upstream 9227 true Chr09: 39174197-39183423 Glycine max
Glyma.09G167500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39178424-39183423 Glycine max
Glyma.09G167500 5.0kb downstream 5.0kb downstream 9227 true Chr09: 39169197-39178423 Glycine max
Glyma.09G167500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39169197-39174196 Glycine max
Glyma.09G167500 10.0kb upstream 10.0kb upstream 14227 true Chr09: 39174197-39188423 Glycine max
Glyma.09G167500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39178424-39188423 Glycine max
Glyma.09G167500 10.0kb downstream 10.0kb downstream 14227 true Chr09: 39164197-39178423 Glycine max
Glyma.09G167500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39164197-39174196 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658320 5273 Angiosperm View MSA
122243335 5265 Fabidae Singleton cluster - no MSA
124041887 5270 Rosid View MSA
123612484 5271 Pentapetalae View MSA
122646983 5272 Eudicot View MSA
120930310 5274 Embryophyte View MSA
122970823 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0536122 0.0 0.22453 Low Low
cufflinks 2.70082 0.0 13.0221   High
cufflinks 0.223338 0.0 1.63432    
cufflinks 0.0872204 0.0 0.359361 Low Low
cufflinks 1.51777 0.0 9.00532    
cufflinks 0.948824 0.0 4.28209    
cufflinks 0.935833 0.0 6.17077    
cufflinks 2.85355 0.0 15.4289   High
cufflinks 0.439395 0.0 2.20469    
cufflinks 0.285       High
cufflinks 0.066        
cufflinks 0.085     Low  
cufflinks 0.102        
cufflinks 0.235        
cufflinks 0.063        
cufflinks 0.216        
cufflinks 0.029     Low Low
cufflinks 0.115        
cufflinks 0.239        
cufflinks 0.18        
cufflinks 0.011     Low Low
cufflinks 0.174        
cufflinks 0.22        
cufflinks 0.036     Low Low
cufflinks 0.184        
cufflinks 0.023     Low Low

0 Strain