Gene : Glyma.09G171800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11614:SF96 - ALPHA/BETA FOLD HYDROLASE FAMILY PROTEIN Genomic Order:  1718
Name:  ? Glyma.09G171800 Secondary Identifier:  ? PAC:30484032
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G171800 0.5kb upstream 0.5kb upstream 1892 true Chr09: 39653396-39655287 Glycine max
Glyma.09G171800 0.5kb upstream 0.5kb upstream 500 false Chr09: 39653396-39653895 Glycine max
Glyma.09G171800 0.5kb downstream 0.5kb downstream 1892 true Chr09: 39653896-39655787 Glycine max
Glyma.09G171800 0.5kb downstream 0.5kb downstream 500 false Chr09: 39655288-39655787 Glycine max
Glyma.09G171800 1.0kb upstream 1.0kb upstream 2392 true Chr09: 39652896-39655287 Glycine max
Glyma.09G171800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39652896-39653895 Glycine max
Glyma.09G171800 1.0kb downstream 1.0kb downstream 2392 true Chr09: 39653896-39656287 Glycine max
Glyma.09G171800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39655288-39656287 Glycine max
Glyma.09G171800 2.0kb upstream 2.0kb upstream 3392 true Chr09: 39651896-39655287 Glycine max
Glyma.09G171800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39651896-39653895 Glycine max
Glyma.09G171800 2.0kb downstream 2.0kb downstream 3392 true Chr09: 39653896-39657287 Glycine max
Glyma.09G171800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39655288-39657287 Glycine max
Glyma.09G171800 5.0kb upstream 5.0kb upstream 6392 true Chr09: 39648896-39655287 Glycine max
Glyma.09G171800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39648896-39653895 Glycine max
Glyma.09G171800 5.0kb downstream 5.0kb downstream 6392 true Chr09: 39653896-39660287 Glycine max
Glyma.09G171800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39655288-39660287 Glycine max
Glyma.09G171800 10.0kb upstream 10.0kb upstream 11392 true Chr09: 39643896-39655287 Glycine max
Glyma.09G171800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39643896-39653895 Glycine max
Glyma.09G171800 10.0kb downstream 10.0kb downstream 11392 true Chr09: 39653896-39665287 Glycine max
Glyma.09G171800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39655288-39665287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243164 5265 Fabidae Singleton cluster - no MSA
124038393 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0670099 0.0 0.303054 Low Low
cufflinks 0.130312 0.0 0.556606 Low  
cufflinks 0.286586 0.0 1.16181    
cufflinks 0.28497 0.0 1.15624    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.131052 0.0 0.558831 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.259        
cufflinks 0.215        
cufflinks 0.145        
cufflinks 0.226        
cufflinks 0.096        
cufflinks 0.027     Low Low
cufflinks 0.254        
cufflinks 0.047     Low Low
cufflinks 0.186        
cufflinks 0.308        
cufflinks 0.193        
cufflinks 0.03     Low Low
cufflinks 0.348       High
cufflinks 0.429       High
cufflinks 0.124        
cufflinks 0.3        
cufflinks 0.091        

0 Strain