Gene : Glyma.09G120200 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0355 - DNA topoisomerase type II Genomic Order:  1202
Name:  ? Glyma.09G120200 Secondary Identifier:  ? PAC:30483346
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G120200 0.5kb upstream 0.5kb upstream 33453 true Chr09: 28746565-28780017 Glycine max
Glyma.09G120200 0.5kb upstream 0.5kb upstream 500 false Chr09: 28779518-28780017 Glycine max
Glyma.09G120200 0.5kb downstream 0.5kb downstream 33453 true Chr09: 28746065-28779517 Glycine max
Glyma.09G120200 0.5kb downstream 0.5kb downstream 500 false Chr09: 28746065-28746564 Glycine max
Glyma.09G120200 1.0kb upstream 1.0kb upstream 33953 true Chr09: 28746565-28780517 Glycine max
Glyma.09G120200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28779518-28780517 Glycine max
Glyma.09G120200 1.0kb downstream 1.0kb downstream 33953 true Chr09: 28745565-28779517 Glycine max
Glyma.09G120200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28745565-28746564 Glycine max
Glyma.09G120200 2.0kb upstream 2.0kb upstream 34953 true Chr09: 28746565-28781517 Glycine max
Glyma.09G120200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28779518-28781517 Glycine max
Glyma.09G120200 2.0kb downstream 2.0kb downstream 34953 true Chr09: 28744565-28779517 Glycine max
Glyma.09G120200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28744565-28746564 Glycine max
Glyma.09G120200 5.0kb upstream 5.0kb upstream 37953 true Chr09: 28746565-28784517 Glycine max
Glyma.09G120200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28779518-28784517 Glycine max
Glyma.09G120200 5.0kb downstream 5.0kb downstream 37953 true Chr09: 28741565-28779517 Glycine max
Glyma.09G120200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28741565-28746564 Glycine max
Glyma.09G120200 10.0kb upstream 10.0kb upstream 42953 true Chr09: 28746565-28789517 Glycine max
Glyma.09G120200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28779518-28789517 Glycine max
Glyma.09G120200 10.0kb downstream 10.0kb downstream 42953 true Chr09: 28736565-28779517 Glycine max
Glyma.09G120200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28736565-28746564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308029 5265 Fabidae View MSA
124064558 5270 Rosid View MSA
123739891 5271 Pentapetalae View MSA
122793828 5272 Eudicot View MSA
122051067 5273 Angiosperm View MSA
121344648 5274 Embryophyte View MSA
123423766 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3217 0.0 30.3067   High
cufflinks 10.1023 0.0 26.9789   High
cufflinks 3.36684 0.0 9.39991   Low
cufflinks 6.05329 0.0 16.2615    
cufflinks 7.51326 0.0 20.0661    
cufflinks 2.87717 0.0 8.1637   Low
cufflinks 6.62046 0.0 17.7362    
cufflinks 5.22135 0.0 14.1193    
cufflinks 5.11525 0.0 13.844    
cufflinks 0.474        
cufflinks 0.129       Low
cufflinks 0.52        
cufflinks 0.676        
cufflinks 0.88        
cufflinks 0.213       Low
cufflinks 1.27       High
cufflinks 0.281        
cufflinks 0.428        
cufflinks 1.195       High
cufflinks 0.757        
cufflinks 0.188       Low
cufflinks 0.88        
cufflinks 1.226       High
cufflinks 0.166       Low
cufflinks 1.098       High
cufflinks 0.256        

0 Strain