Gene : Glyma.09G103100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15189:SF7 - BRCA1-A COMPLEX SUBUNIT BRE Genomic Order:  1031
Name:  ? Glyma.09G103100 Secondary Identifier:  ? PAC:30484027
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G103100 0.5kb upstream 0.5kb upstream 7861 true Chr09: 19060032-19067892 Glycine max
Glyma.09G103100 0.5kb upstream 0.5kb upstream 500 false Chr09: 19067393-19067892 Glycine max
Glyma.09G103100 0.5kb downstream 0.5kb downstream 7861 true Chr09: 19059532-19067392 Glycine max
Glyma.09G103100 0.5kb downstream 0.5kb downstream 500 false Chr09: 19059532-19060031 Glycine max
Glyma.09G103100 1.0kb upstream 1.0kb upstream 8361 true Chr09: 19060032-19068392 Glycine max
Glyma.09G103100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19067393-19068392 Glycine max
Glyma.09G103100 1.0kb downstream 1.0kb downstream 8361 true Chr09: 19059032-19067392 Glycine max
Glyma.09G103100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19059032-19060031 Glycine max
Glyma.09G103100 2.0kb upstream 2.0kb upstream 9361 true Chr09: 19060032-19069392 Glycine max
Glyma.09G103100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19067393-19069392 Glycine max
Glyma.09G103100 2.0kb downstream 2.0kb downstream 9361 true Chr09: 19058032-19067392 Glycine max
Glyma.09G103100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19058032-19060031 Glycine max
Glyma.09G103100 5.0kb upstream 5.0kb upstream 12361 true Chr09: 19060032-19072392 Glycine max
Glyma.09G103100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19067393-19072392 Glycine max
Glyma.09G103100 5.0kb downstream 5.0kb downstream 12361 true Chr09: 19055032-19067392 Glycine max
Glyma.09G103100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19055032-19060031 Glycine max
Glyma.09G103100 10.0kb upstream 10.0kb upstream 17361 true Chr09: 19060032-19077392 Glycine max
Glyma.09G103100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19067393-19077392 Glycine max
Glyma.09G103100 10.0kb downstream 10.0kb downstream 17361 true Chr09: 19050032-19067392 Glycine max
Glyma.09G103100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19050032-19060031 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308160 5265 Fabidae View MSA
124062170 5270 Rosid View MSA
123740912 5271 Pentapetalae View MSA
122788838 5272 Eudicot View MSA
122044456 5273 Angiosperm View MSA
121345722 5274 Embryophyte View MSA
123380259 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7243 0.0 79.7744    
cufflinks 13.1671 0.0 53.389    
cufflinks 12.5724 0.0 55.0824    
cufflinks 17.1179 0.0 74.4309    
cufflinks 20.1365 0.0 85.9744 High  
cufflinks 11.8495 0.0 51.9962   Low
cufflinks 28.408 0.0 113.77 High High
cufflinks 14.8846 0.0 59.5888    
cufflinks 15.3889 0.0 65.9768    
cufflinks 0.7        
cufflinks 0.511       Low
cufflinks 0.683        
cufflinks 0.921       High
cufflinks 1.203       High
cufflinks 0.714        
cufflinks 0.662        
cufflinks 0.636        
cufflinks 0.698        
cufflinks 0.9       High
cufflinks 0.676        
cufflinks 0.62        
cufflinks 0.7        
cufflinks 0.673        
cufflinks 0.589        
cufflinks 0.666        
cufflinks 0.677        

0 Strain