Gene : Glyma.09G102900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Genomic Order:  1029
Name:  ? Glyma.09G102900 Secondary Identifier:  ? PAC:30486880
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G102900 0.5kb upstream 0.5kb upstream 4887 true Chr09: 18988001-18992887 Glycine max
Glyma.09G102900 0.5kb upstream 0.5kb upstream 500 false Chr09: 18992388-18992887 Glycine max
Glyma.09G102900 0.5kb downstream 0.5kb downstream 4887 true Chr09: 18987501-18992387 Glycine max
Glyma.09G102900 0.5kb downstream 0.5kb downstream 500 false Chr09: 18987501-18988000 Glycine max
Glyma.09G102900 1.0kb upstream 1.0kb upstream 5387 true Chr09: 18988001-18993387 Glycine max
Glyma.09G102900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 18992388-18993387 Glycine max
Glyma.09G102900 1.0kb downstream 1.0kb downstream 5387 true Chr09: 18987001-18992387 Glycine max
Glyma.09G102900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 18987001-18988000 Glycine max
Glyma.09G102900 2.0kb upstream 2.0kb upstream 6387 true Chr09: 18988001-18994387 Glycine max
Glyma.09G102900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 18992388-18994387 Glycine max
Glyma.09G102900 2.0kb downstream 2.0kb downstream 6387 true Chr09: 18986001-18992387 Glycine max
Glyma.09G102900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 18986001-18988000 Glycine max
Glyma.09G102900 5.0kb upstream 5.0kb upstream 9387 true Chr09: 18988001-18997387 Glycine max
Glyma.09G102900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 18992388-18997387 Glycine max
Glyma.09G102900 5.0kb downstream 5.0kb downstream 9387 true Chr09: 18983001-18992387 Glycine max
Glyma.09G102900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 18983001-18988000 Glycine max
Glyma.09G102900 10.0kb upstream 10.0kb upstream 14387 true Chr09: 18988001-19002387 Glycine max
Glyma.09G102900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 18992388-19002387 Glycine max
Glyma.09G102900 10.0kb downstream 10.0kb downstream 14387 true Chr09: 18978001-18992387 Glycine max
Glyma.09G102900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 18978001-18988000 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314270 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.2397 0.0 77.0845 High High
cufflinks 15.8232 0.0 48.3397    
cufflinks 9.91763 0.0 30.5235   Low
cufflinks 23.5959 0.0 77.8334 High  
cufflinks 19.0592 0.0 60.2295    
cufflinks 26.2741 0.0 85.1711 High High
cufflinks 9.15045 0.0 28.054   Low
cufflinks 13.4384 0.0 40.1943    
cufflinks 11.5131 0.0 35.154    
cufflinks 3.383        
cufflinks 3.348        
cufflinks 5.472        
cufflinks 4.413        
cufflinks 4.58        
cufflinks 1.999       Low
cufflinks 3.917        
cufflinks 1.45       Low
cufflinks 7.507     High High
cufflinks 7.699     High High
cufflinks 3.412        
cufflinks 2.445        
cufflinks 3.411        
cufflinks 3.591        
cufflinks 4.201        
cufflinks 3.519        
cufflinks 2.618        

0 Strain