Gene : Glyma.09G012200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  122
Name:  ? Glyma.09G012200 Secondary Identifier:  ? PAC:30483946
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G012200 0.5kb upstream 0.5kb upstream 3697 true Chr09: 936548-940244 Glycine max
Glyma.09G012200 0.5kb upstream 0.5kb upstream 500 false Chr09: 936548-937047 Glycine max
Glyma.09G012200 0.5kb downstream 0.5kb downstream 3697 true Chr09: 937048-940744 Glycine max
Glyma.09G012200 0.5kb downstream 0.5kb downstream 500 false Chr09: 940245-940744 Glycine max
Glyma.09G012200 1.0kb upstream 1.0kb upstream 4197 true Chr09: 936048-940244 Glycine max
Glyma.09G012200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 936048-937047 Glycine max
Glyma.09G012200 1.0kb downstream 1.0kb downstream 4197 true Chr09: 937048-941244 Glycine max
Glyma.09G012200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 940245-941244 Glycine max
Glyma.09G012200 2.0kb upstream 2.0kb upstream 5197 true Chr09: 935048-940244 Glycine max
Glyma.09G012200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 935048-937047 Glycine max
Glyma.09G012200 2.0kb downstream 2.0kb downstream 5197 true Chr09: 937048-942244 Glycine max
Glyma.09G012200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 940245-942244 Glycine max
Glyma.09G012200 5.0kb upstream 5.0kb upstream 8197 true Chr09: 932048-940244 Glycine max
Glyma.09G012200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 932048-937047 Glycine max
Glyma.09G012200 5.0kb downstream 5.0kb downstream 8197 true Chr09: 937048-945244 Glycine max
Glyma.09G012200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 940245-945244 Glycine max
Glyma.09G012200 10.0kb upstream 10.0kb upstream 13197 true Chr09: 927048-940244 Glycine max
Glyma.09G012200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 927048-937047 Glycine max
Glyma.09G012200 10.0kb downstream 10.0kb downstream 13197 true Chr09: 937048-950244 Glycine max
Glyma.09G012200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 940245-950244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309568 5265 Fabidae View MSA
124074610 5270 Rosid View MSA
123751007 5271 Pentapetalae View MSA
122791219 5272 Eudicot View MSA
122049002 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.157932 0.0 0.618503 Low Low
cufflinks 11.5136 0.0 31.2604   High
cufflinks 4.11676 0.0 12.3921    
cufflinks 2.63696 0.0 8.49898    
cufflinks 0.473482 0.0 1.76908   Low
cufflinks 3.44326 0.0 10.7035    
cufflinks 11.7261 0.0 31.8362   High
cufflinks 2.95277 0.0 9.38052    
cufflinks 0.662365 0.0 2.42903    
cufflinks 0.332        
cufflinks 0.21        
cufflinks 4.042        
cufflinks 0.218        
cufflinks 0.085       Low
cufflinks 0.018     Low Low
cufflinks 5.381       High
cufflinks 0.351        
cufflinks 1.719        
cufflinks 5.781       High
cufflinks 5.183       High
cufflinks 0.413        
cufflinks 3.938        
cufflinks 3.602        
cufflinks 0.539        
cufflinks 4.518        
cufflinks 0.464        

0 Strain