Gene : Glyma.09G015500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19288:SF33 - PHOSPHOGLYCOLATE PHOSPHATASE 2 Genomic Order:  155
Name:  ? Glyma.09G015500 Secondary Identifier:  ? PAC:30486262
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G015500 0.5kb upstream 0.5kb upstream 5323 true Chr09: 1187004-1192326 Glycine max
Glyma.09G015500 0.5kb upstream 0.5kb upstream 500 false Chr09: 1191827-1192326 Glycine max
Glyma.09G015500 0.5kb downstream 0.5kb downstream 5323 true Chr09: 1186504-1191826 Glycine max
Glyma.09G015500 0.5kb downstream 0.5kb downstream 500 false Chr09: 1186504-1187003 Glycine max
Glyma.09G015500 1.0kb upstream 1.0kb upstream 5823 true Chr09: 1187004-1192826 Glycine max
Glyma.09G015500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1191827-1192826 Glycine max
Glyma.09G015500 1.0kb downstream 1.0kb downstream 5823 true Chr09: 1186004-1191826 Glycine max
Glyma.09G015500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1186004-1187003 Glycine max
Glyma.09G015500 2.0kb upstream 2.0kb upstream 6823 true Chr09: 1187004-1193826 Glycine max
Glyma.09G015500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1191827-1193826 Glycine max
Glyma.09G015500 2.0kb downstream 2.0kb downstream 6823 true Chr09: 1185004-1191826 Glycine max
Glyma.09G015500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1185004-1187003 Glycine max
Glyma.09G015500 5.0kb upstream 5.0kb upstream 9823 true Chr09: 1187004-1196826 Glycine max
Glyma.09G015500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1191827-1196826 Glycine max
Glyma.09G015500 5.0kb downstream 5.0kb downstream 9823 true Chr09: 1182004-1191826 Glycine max
Glyma.09G015500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1182004-1187003 Glycine max
Glyma.09G015500 10.0kb upstream 10.0kb upstream 14823 true Chr09: 1187004-1201826 Glycine max
Glyma.09G015500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1191827-1201826 Glycine max
Glyma.09G015500 10.0kb downstream 10.0kb downstream 14823 true Chr09: 1177004-1191826 Glycine max
Glyma.09G015500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1177004-1187003 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303967 5265 Fabidae View MSA
124065026 5270 Rosid View MSA
123739425 5271 Pentapetalae View MSA
122788860 5272 Eudicot View MSA
122049940 5273 Angiosperm View MSA
121343932 5274 Embryophyte View MSA
123425073 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2053 0.0 79.0211    
cufflinks 7.45837 0.0 33.1766    
cufflinks 28.5438 0.0 106.669 High High
cufflinks 7.40515 0.0 29.1786    
cufflinks 18.6965 0.0 83.5913    
cufflinks 41.6823 0.0 176.771 High High
cufflinks 5.15879 0.0 34.8599   Low
cufflinks 10.8201 0.0 43.8517    
cufflinks 15.7134 0.0 60.9969    
cufflinks 0.439       Low
cufflinks 0.754        
cufflinks 0.881        
cufflinks 1.158       High
cufflinks 0.888        
cufflinks 0.605        
cufflinks 0.523        
cufflinks 0.693        
cufflinks 0.435       Low
cufflinks 0.54        
cufflinks 0.496        
cufflinks 0.736        
cufflinks 0.543        
cufflinks 0.577        
cufflinks 1.111       High
cufflinks 0.533        
cufflinks 1.112       High

0 Strain