Gene : Glyma.09G023700 G. max Wm82.a2.v1
Defline:  (1 of 4) PF01599 - Ribosomal protein S27a (Ribosomal_S27) Genomic Order:  237
Name:  ? Glyma.09G023700 Secondary Identifier:  ? PAC:30485466
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G023700 0.5kb upstream 0.5kb upstream 1268 true Chr09: 1934456-1935723 Glycine max
Glyma.09G023700 0.5kb upstream 0.5kb upstream 500 false Chr09: 1934456-1934955 Glycine max
Glyma.09G023700 0.5kb downstream 0.5kb downstream 1268 true Chr09: 1934956-1936223 Glycine max
Glyma.09G023700 0.5kb downstream 0.5kb downstream 500 false Chr09: 1935724-1936223 Glycine max
Glyma.09G023700 1.0kb upstream 1.0kb upstream 1768 true Chr09: 1933956-1935723 Glycine max
Glyma.09G023700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 1933956-1934955 Glycine max
Glyma.09G023700 1.0kb downstream 1.0kb downstream 1768 true Chr09: 1934956-1936723 Glycine max
Glyma.09G023700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 1935724-1936723 Glycine max
Glyma.09G023700 2.0kb upstream 2.0kb upstream 2768 true Chr09: 1932956-1935723 Glycine max
Glyma.09G023700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 1932956-1934955 Glycine max
Glyma.09G023700 2.0kb downstream 2.0kb downstream 2768 true Chr09: 1934956-1937723 Glycine max
Glyma.09G023700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 1935724-1937723 Glycine max
Glyma.09G023700 5.0kb upstream 5.0kb upstream 5768 true Chr09: 1929956-1935723 Glycine max
Glyma.09G023700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 1929956-1934955 Glycine max
Glyma.09G023700 5.0kb downstream 5.0kb downstream 5768 true Chr09: 1934956-1940723 Glycine max
Glyma.09G023700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 1935724-1940723 Glycine max
Glyma.09G023700 10.0kb upstream 10.0kb upstream 10768 true Chr09: 1924956-1935723 Glycine max
Glyma.09G023700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 1924956-1934955 Glycine max
Glyma.09G023700 10.0kb downstream 10.0kb downstream 10768 true Chr09: 1934956-1945723 Glycine max
Glyma.09G023700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 1935724-1945723 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792627 5273 Angiosperm View MSA
122242941 5265 Fabidae Singleton cluster - no MSA
123987545 5270 Rosid Singleton cluster - no MSA
123647131 5271 Pentapetalae View MSA
122798275 5272 Eudicot View MSA
121063843 5274 Embryophyte View MSA
123103558 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7447 0.0 64.346 High Low
cufflinks 43.8476 0.0 116.988 High  
cufflinks 19.7906 0.0 54.5573   Low
cufflinks 23.1979 0.0 62.9416 High Low
cufflinks 61.178 0.0 165.091 High High
cufflinks 52.5433 0.0 140.702 High  
cufflinks 49.8983 0.0 133.488 High  
cufflinks 40.6763 0.0 108.519 High  
cufflinks 38.0632 0.0 101.576 High  
cufflinks 31.741     High  
cufflinks 8.75     High Low
cufflinks 18.725     High  
cufflinks 68.496     High High
cufflinks 108.284     High High
cufflinks 8.082     High Low
cufflinks 21.524     High  
cufflinks 20.648     High  
cufflinks 22.022     High  
cufflinks 40.693     High  
cufflinks 16.924     High  
cufflinks 12.933     High  
cufflinks 18.102     High  
cufflinks 35.543     High  
cufflinks 10.785     High Low
cufflinks 16.847     High  
cufflinks 17.498     High  

0 Strain