Gene : Glyma.08G363700 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00458//PF00587//PF03129 - WHEP-TRS domain (WHEP-TRS) // tRNA synthetase class II core domain (G, H, P, S and T) (tRNA-synt_2b) // Anticodon binding domain (HGTP_anticodon) Genomic Order:  3637
Name:  ? Glyma.08G363700 Secondary Identifier:  ? PAC:30540473
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G363700 0.5kb upstream 0.5kb upstream 6904 true Chr08: 47520208-47527111 Glycine max
Glyma.08G363700 0.5kb upstream 0.5kb upstream 500 false Chr08: 47526612-47527111 Glycine max
Glyma.08G363700 0.5kb downstream 0.5kb downstream 6904 true Chr08: 47519708-47526611 Glycine max
Glyma.08G363700 0.5kb downstream 0.5kb downstream 500 false Chr08: 47519708-47520207 Glycine max
Glyma.08G363700 1.0kb upstream 1.0kb upstream 7404 true Chr08: 47520208-47527611 Glycine max
Glyma.08G363700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 47526612-47527611 Glycine max
Glyma.08G363700 1.0kb downstream 1.0kb downstream 7404 true Chr08: 47519208-47526611 Glycine max
Glyma.08G363700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 47519208-47520207 Glycine max
Glyma.08G363700 2.0kb upstream 2.0kb upstream 8404 true Chr08: 47520208-47528611 Glycine max
Glyma.08G363700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 47526612-47528611 Glycine max
Glyma.08G363700 2.0kb downstream 2.0kb downstream 8404 true Chr08: 47518208-47526611 Glycine max
Glyma.08G363700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 47518208-47520207 Glycine max
Glyma.08G363700 5.0kb upstream 5.0kb upstream 11404 true Chr08: 47520208-47531611 Glycine max
Glyma.08G363700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 47526612-47531611 Glycine max
Glyma.08G363700 5.0kb downstream 5.0kb downstream 11404 true Chr08: 47515208-47526611 Glycine max
Glyma.08G363700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 47515208-47520207 Glycine max
Glyma.08G363700 10.0kb upstream 10.0kb upstream 16404 true Chr08: 47520208-47536611 Glycine max
Glyma.08G363700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 47526612-47536611 Glycine max
Glyma.08G363700 10.0kb downstream 10.0kb downstream 16404 true Chr08: 47510208-47526611 Glycine max
Glyma.08G363700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 47510208-47520207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302304 5265 Fabidae View MSA
124063587 5270 Rosid View MSA
123751424 5271 Pentapetalae View MSA
122793864 5272 Eudicot View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.4569 0.0 180.185 High High
cufflinks 26.2088 0.0 72.4315 High  
cufflinks 43.9208 0.0 128.93 High  
cufflinks 33.3527 0.0 94.6065 High  
cufflinks 35.4329 0.0 101.719 High  
cufflinks 16.6932 0.0 44.887   Low
cufflinks 39.8542 0.0 115.899 High  
cufflinks 32.4153 0.0 91.7359 High  
cufflinks 25.5908 0.0 70.7014 High  
cufflinks 9.427     High  
cufflinks 6.53     High Low
cufflinks 15.603     High  
cufflinks 14.592     High  
cufflinks 18.804     High High
cufflinks 6.913     High Low
cufflinks 12.777     High  
cufflinks 6.932     High Low
cufflinks 13.448     High  
cufflinks 13.977     High  
cufflinks 17.151     High High
cufflinks 8.118     High  
cufflinks 15.94     High  
cufflinks 14.534     High  
cufflinks 8.976     High  
cufflinks 14.25     High  
cufflinks 7.297     High Low

0 Strain