Gene : Glyma.08G309400 G. max Wm82.a2.v1
Defline:  (1 of 10) KOG4660 - Protein Mei2, essential for commitment to meiosis, and related proteins Genomic Order:  3094
Name:  ? Glyma.08G309400 Secondary Identifier:  ? PAC:30536839
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G309400 0.5kb upstream 0.5kb upstream 9686 true Chr08: 42839509-42849194 Glycine max
Glyma.08G309400 0.5kb upstream 0.5kb upstream 500 false Chr08: 42848695-42849194 Glycine max
Glyma.08G309400 0.5kb downstream 0.5kb downstream 9686 true Chr08: 42839009-42848694 Glycine max
Glyma.08G309400 0.5kb downstream 0.5kb downstream 500 false Chr08: 42839009-42839508 Glycine max
Glyma.08G309400 1.0kb upstream 1.0kb upstream 10186 true Chr08: 42839509-42849694 Glycine max
Glyma.08G309400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42848695-42849694 Glycine max
Glyma.08G309400 1.0kb downstream 1.0kb downstream 10186 true Chr08: 42838509-42848694 Glycine max
Glyma.08G309400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42838509-42839508 Glycine max
Glyma.08G309400 2.0kb upstream 2.0kb upstream 11186 true Chr08: 42839509-42850694 Glycine max
Glyma.08G309400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42848695-42850694 Glycine max
Glyma.08G309400 2.0kb downstream 2.0kb downstream 11186 true Chr08: 42837509-42848694 Glycine max
Glyma.08G309400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42837509-42839508 Glycine max
Glyma.08G309400 5.0kb upstream 5.0kb upstream 14186 true Chr08: 42839509-42853694 Glycine max
Glyma.08G309400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42848695-42853694 Glycine max
Glyma.08G309400 5.0kb downstream 5.0kb downstream 14186 true Chr08: 42834509-42848694 Glycine max
Glyma.08G309400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42834509-42839508 Glycine max
Glyma.08G309400 10.0kb upstream 10.0kb upstream 19186 true Chr08: 42839509-42858694 Glycine max
Glyma.08G309400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42848695-42858694 Glycine max
Glyma.08G309400 10.0kb downstream 10.0kb downstream 19186 true Chr08: 42829509-42848694 Glycine max
Glyma.08G309400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42829509-42839508 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302804 5265 Fabidae View MSA
124070697 5270 Rosid View MSA
123742747 5271 Pentapetalae View MSA
122790656 5272 Eudicot View MSA
122046882 5273 Angiosperm View MSA
121349156 5274 Embryophyte View MSA
123428382 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.01116 0.0 24.0427    
cufflinks 5.76263 0.0 15.5536    
cufflinks 48.7129 0.0 151.486 High High
cufflinks 6.28792 0.0 16.905    
cufflinks 6.42469 0.0 17.2691    
cufflinks 16.7294 0.0 45.458    
cufflinks 6.8644 0.0 18.4072    
cufflinks 9.06275 0.0 24.1785    
cufflinks 9.16349 0.0 24.4474    
cufflinks 1.938        
cufflinks 2.692        
cufflinks 9.453     High High
cufflinks 2.064        
cufflinks 0.945       Low
cufflinks 5.584     High High
cufflinks 2.873        
cufflinks 1.777        
cufflinks 3.841        
cufflinks 3.189        
cufflinks 3.765        
cufflinks 2.048        
cufflinks 3.724        
cufflinks 2.566        
cufflinks 3.027        
cufflinks 3.565        
cufflinks 1.988        

0 Strain