Gene : Glyma.08G330300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15092:SF22 - TARGET OF EGR1 PROTEIN 1 Genomic Order:  3303
Name:  ? Glyma.08G330300 Secondary Identifier:  ? PAC:30536667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G330300 0.5kb upstream 0.5kb upstream 7103 true Chr08: 44812074-44819176 Glycine max
Glyma.08G330300 0.5kb upstream 0.5kb upstream 500 false Chr08: 44818677-44819176 Glycine max
Glyma.08G330300 0.5kb downstream 0.5kb downstream 7103 true Chr08: 44811574-44818676 Glycine max
Glyma.08G330300 0.5kb downstream 0.5kb downstream 500 false Chr08: 44811574-44812073 Glycine max
Glyma.08G330300 1.0kb upstream 1.0kb upstream 7603 true Chr08: 44812074-44819676 Glycine max
Glyma.08G330300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44818677-44819676 Glycine max
Glyma.08G330300 1.0kb downstream 1.0kb downstream 7603 true Chr08: 44811074-44818676 Glycine max
Glyma.08G330300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44811074-44812073 Glycine max
Glyma.08G330300 2.0kb upstream 2.0kb upstream 8603 true Chr08: 44812074-44820676 Glycine max
Glyma.08G330300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44818677-44820676 Glycine max
Glyma.08G330300 2.0kb downstream 2.0kb downstream 8603 true Chr08: 44810074-44818676 Glycine max
Glyma.08G330300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44810074-44812073 Glycine max
Glyma.08G330300 5.0kb upstream 5.0kb upstream 11603 true Chr08: 44812074-44823676 Glycine max
Glyma.08G330300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44818677-44823676 Glycine max
Glyma.08G330300 5.0kb downstream 5.0kb downstream 11603 true Chr08: 44807074-44818676 Glycine max
Glyma.08G330300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44807074-44812073 Glycine max
Glyma.08G330300 10.0kb upstream 10.0kb upstream 16603 true Chr08: 44812074-44828676 Glycine max
Glyma.08G330300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44818677-44828676 Glycine max
Glyma.08G330300 10.0kb downstream 10.0kb downstream 16603 true Chr08: 44802074-44818676 Glycine max
Glyma.08G330300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44802074-44812073 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309049 5265 Fabidae View MSA
124073330 5270 Rosid View MSA
123738401 5271 Pentapetalae View MSA
122796847 5272 Eudicot View MSA
122041531 5273 Angiosperm View MSA
121345225 5274 Embryophyte View MSA
123427620 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75592 0.0 15.3743   High
cufflinks 2.1312 0.0 8.26737    
cufflinks 1.09322 0.0 6.21101   Low
cufflinks 2.12468 0.0 10.0849    
cufflinks 1.80565 0.0 7.63407    
cufflinks 1.52468 0.0 5.0673    
cufflinks 3.40359 0.0 13.4362   High
cufflinks 1.77137 0.0 7.3093    
cufflinks 1.77898 0.0 7.37225    
cufflinks 0.127        
cufflinks 0.038     Low Low
cufflinks 0.153        
cufflinks 0.153        
cufflinks 0.197       High
cufflinks 0.093        
cufflinks 0.118        
cufflinks 0.046     Low Low
cufflinks 0.131        
cufflinks 0.214       High
cufflinks 0.106        
cufflinks 0.061     Low  
cufflinks 0.122        
cufflinks 0.184       High
cufflinks 0.045     Low Low
cufflinks 0.109        
cufflinks 0.077        

0 Strain