Gene : Glyma.08G329200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13468:SF1 - PROTEIN DEK Genomic Order:  3292
Name:  ? Glyma.08G329200 Secondary Identifier:  ? PAC:30538817
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G329200 0.5kb upstream 0.5kb upstream 16520 true Chr08: 44695702-44712221 Glycine max
Glyma.08G329200 0.5kb upstream 0.5kb upstream 500 false Chr08: 44695702-44696201 Glycine max
Glyma.08G329200 0.5kb downstream 0.5kb downstream 16520 true Chr08: 44696202-44712721 Glycine max
Glyma.08G329200 0.5kb downstream 0.5kb downstream 500 false Chr08: 44712222-44712721 Glycine max
Glyma.08G329200 1.0kb upstream 1.0kb upstream 17020 true Chr08: 44695202-44712221 Glycine max
Glyma.08G329200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44695202-44696201 Glycine max
Glyma.08G329200 1.0kb downstream 1.0kb downstream 17020 true Chr08: 44696202-44713221 Glycine max
Glyma.08G329200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44712222-44713221 Glycine max
Glyma.08G329200 2.0kb upstream 2.0kb upstream 18020 true Chr08: 44694202-44712221 Glycine max
Glyma.08G329200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44694202-44696201 Glycine max
Glyma.08G329200 2.0kb downstream 2.0kb downstream 18020 true Chr08: 44696202-44714221 Glycine max
Glyma.08G329200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44712222-44714221 Glycine max
Glyma.08G329200 5.0kb upstream 5.0kb upstream 21020 true Chr08: 44691202-44712221 Glycine max
Glyma.08G329200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44691202-44696201 Glycine max
Glyma.08G329200 5.0kb downstream 5.0kb downstream 21020 true Chr08: 44696202-44717221 Glycine max
Glyma.08G329200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44712222-44717221 Glycine max
Glyma.08G329200 10.0kb upstream 10.0kb upstream 26020 true Chr08: 44686202-44712221 Glycine max
Glyma.08G329200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44686202-44696201 Glycine max
Glyma.08G329200 10.0kb downstream 10.0kb downstream 26020 true Chr08: 44696202-44722221 Glycine max
Glyma.08G329200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44712222-44722221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312420 5265 Fabidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0056 0.0 65.2792    
cufflinks 29.2508 0.0 152.799 High High
cufflinks 14.1118 0.0 56.3244    
cufflinks 22.6898 0.0 110.429 High  
cufflinks 12.4715 0.0 48.4677    
cufflinks 8.93695 0.0 33.9707   Low
cufflinks 27.0979 0.0 136.735 High High
cufflinks 14.6324 0.0 52.5404    
cufflinks 23.6432 0.0 105.201 High  
cufflinks 0.95        
cufflinks 0.348       Low
cufflinks 2.345       High
cufflinks 1.256        
cufflinks 1.103        
cufflinks 1.106        
cufflinks 1.598        
cufflinks 0.41       Low
cufflinks 2.964       High
cufflinks 1.734        
cufflinks 1.824        
cufflinks 0.482       Low
cufflinks 1.798        
cufflinks 1.333        
cufflinks 0.412       Low
cufflinks 1.744        
cufflinks 0.965        

0 Strain