Gene : Glyma.08G300100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11932//PTHR11932:SF86 - CULLIN Genomic Order:  3001
Name:  ? Glyma.08G300100 Secondary Identifier:  ? PAC:30535786
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G300100 0.5kb upstream 0.5kb upstream 7944 true Chr08: 41818295-41826238 Glycine max
Glyma.08G300100 0.5kb upstream 0.5kb upstream 500 false Chr08: 41818295-41818794 Glycine max
Glyma.08G300100 0.5kb downstream 0.5kb downstream 7944 true Chr08: 41818795-41826738 Glycine max
Glyma.08G300100 0.5kb downstream 0.5kb downstream 500 false Chr08: 41826239-41826738 Glycine max
Glyma.08G300100 1.0kb upstream 1.0kb upstream 8444 true Chr08: 41817795-41826238 Glycine max
Glyma.08G300100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41817795-41818794 Glycine max
Glyma.08G300100 1.0kb downstream 1.0kb downstream 8444 true Chr08: 41818795-41827238 Glycine max
Glyma.08G300100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41826239-41827238 Glycine max
Glyma.08G300100 2.0kb upstream 2.0kb upstream 9444 true Chr08: 41816795-41826238 Glycine max
Glyma.08G300100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41816795-41818794 Glycine max
Glyma.08G300100 2.0kb downstream 2.0kb downstream 9444 true Chr08: 41818795-41828238 Glycine max
Glyma.08G300100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41826239-41828238 Glycine max
Glyma.08G300100 5.0kb upstream 5.0kb upstream 12444 true Chr08: 41813795-41826238 Glycine max
Glyma.08G300100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41813795-41818794 Glycine max
Glyma.08G300100 5.0kb downstream 5.0kb downstream 12444 true Chr08: 41818795-41831238 Glycine max
Glyma.08G300100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41826239-41831238 Glycine max
Glyma.08G300100 10.0kb upstream 10.0kb upstream 17444 true Chr08: 41808795-41826238 Glycine max
Glyma.08G300100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41808795-41818794 Glycine max
Glyma.08G300100 10.0kb downstream 10.0kb downstream 17444 true Chr08: 41818795-41836238 Glycine max
Glyma.08G300100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41826239-41836238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301106 5265 Fabidae View MSA
124060963 5270 Rosid View MSA
123747222 5271 Pentapetalae View MSA
122785909 5272 Eudicot View MSA
122047217 5273 Angiosperm View MSA
121346252 5274 Embryophyte View MSA
123427758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04879 0.0 23.8324    
cufflinks 4.74162 0.0 15.0261    
cufflinks 6.41841 0.0 22.4528    
cufflinks 4.26555 0.0 17.7251    
cufflinks 6.24087 0.0 22.0925    
cufflinks 11.368 0.0 38.934   High
cufflinks 2.41688 0.0 10.9216   Low
cufflinks 8.05427 0.0 27.667    
cufflinks 5.08652 0.0 18.3332    
cufflinks 2.54        
cufflinks 3.345       High
cufflinks 1.31        
cufflinks 2.168        
cufflinks 2.144        
cufflinks 1.774        
cufflinks 1.193        
cufflinks 2.207        
cufflinks 1.31        
cufflinks 0.958       Low
cufflinks 1.215        
cufflinks 2.744       High
cufflinks 1.25        
cufflinks 1.128       Low
cufflinks 2.63       High
cufflinks 1.185        
cufflinks 2.468        

0 Strain