Gene : Glyma.08G252900 G. max Wm82.a2.v1
Defline:  (1 of 83) PF10250 - GDP-fucose protein O-fucosyltransferase (O-FucT) Genomic Order:  2529
Name:  ? Glyma.08G252900 Secondary Identifier:  ? PAC:30537777
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G252900 0.5kb upstream 0.5kb upstream 6274 true Chr08: 22218657-22224930 Glycine max
Glyma.08G252900 0.5kb upstream 0.5kb upstream 500 false Chr08: 22224431-22224930 Glycine max
Glyma.08G252900 0.5kb downstream 0.5kb downstream 6274 true Chr08: 22218157-22224430 Glycine max
Glyma.08G252900 0.5kb downstream 0.5kb downstream 500 false Chr08: 22218157-22218656 Glycine max
Glyma.08G252900 1.0kb upstream 1.0kb upstream 6774 true Chr08: 22218657-22225430 Glycine max
Glyma.08G252900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 22224431-22225430 Glycine max
Glyma.08G252900 1.0kb downstream 1.0kb downstream 6774 true Chr08: 22217657-22224430 Glycine max
Glyma.08G252900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 22217657-22218656 Glycine max
Glyma.08G252900 2.0kb upstream 2.0kb upstream 7774 true Chr08: 22218657-22226430 Glycine max
Glyma.08G252900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 22224431-22226430 Glycine max
Glyma.08G252900 2.0kb downstream 2.0kb downstream 7774 true Chr08: 22216657-22224430 Glycine max
Glyma.08G252900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 22216657-22218656 Glycine max
Glyma.08G252900 5.0kb upstream 5.0kb upstream 10774 true Chr08: 22218657-22229430 Glycine max
Glyma.08G252900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 22224431-22229430 Glycine max
Glyma.08G252900 5.0kb downstream 5.0kb downstream 10774 true Chr08: 22213657-22224430 Glycine max
Glyma.08G252900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 22213657-22218656 Glycine max
Glyma.08G252900 10.0kb upstream 10.0kb upstream 15774 true Chr08: 22218657-22234430 Glycine max
Glyma.08G252900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 22224431-22234430 Glycine max
Glyma.08G252900 10.0kb downstream 10.0kb downstream 15774 true Chr08: 22208657-22224430 Glycine max
Glyma.08G252900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 22208657-22218656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304923 5265 Fabidae View MSA
124062745 5270 Rosid View MSA
123736850 5271 Pentapetalae View MSA
122793711 5272 Eudicot View MSA
122046300 5273 Angiosperm View MSA
121347853 5274 Embryophyte View MSA
123380653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28712 0.0 6.93221    
cufflinks 4.09826 0.0 11.5225   High
cufflinks 1.15536 0.0 3.83119   Low
cufflinks 3.12117 0.0 9.05209    
cufflinks 2.95362 0.0 8.66265    
cufflinks 2.01107 0.0 6.20758    
cufflinks 1.02477 0.0 3.47827   Low
cufflinks 1.7426 0.0 5.46935    
cufflinks 2.79647 0.0 8.22966    
cufflinks 2.105        
cufflinks 0.182       Low
cufflinks 1.833        
cufflinks 1.939        
cufflinks 2.349        
cufflinks 0.522        
cufflinks 2.722        
cufflinks 0.478        
cufflinks 2.517        
cufflinks 3.671        
cufflinks 3.371        
cufflinks 0.296       Low
cufflinks 3.162        
cufflinks 7.056       High
cufflinks 0.322       Low
cufflinks 3.194        
cufflinks 0.403       Low

0 Strain