Gene : Glyma.08G276900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2506 - SpoU rRNA Methylase family protein Genomic Order:  2769
Name:  ? Glyma.08G276900 Secondary Identifier:  ? PAC:30538203
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G276900 0.5kb upstream 0.5kb upstream 14679 true Chr08: 37016360-37031038 Glycine max
Glyma.08G276900 0.5kb upstream 0.5kb upstream 500 false Chr08: 37016360-37016859 Glycine max
Glyma.08G276900 0.5kb downstream 0.5kb downstream 14679 true Chr08: 37016860-37031538 Glycine max
Glyma.08G276900 0.5kb downstream 0.5kb downstream 500 false Chr08: 37031039-37031538 Glycine max
Glyma.08G276900 1.0kb upstream 1.0kb upstream 15179 true Chr08: 37015860-37031038 Glycine max
Glyma.08G276900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 37015860-37016859 Glycine max
Glyma.08G276900 1.0kb downstream 1.0kb downstream 15179 true Chr08: 37016860-37032038 Glycine max
Glyma.08G276900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 37031039-37032038 Glycine max
Glyma.08G276900 2.0kb upstream 2.0kb upstream 16179 true Chr08: 37014860-37031038 Glycine max
Glyma.08G276900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 37014860-37016859 Glycine max
Glyma.08G276900 2.0kb downstream 2.0kb downstream 16179 true Chr08: 37016860-37033038 Glycine max
Glyma.08G276900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 37031039-37033038 Glycine max
Glyma.08G276900 5.0kb upstream 5.0kb upstream 19179 true Chr08: 37011860-37031038 Glycine max
Glyma.08G276900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 37011860-37016859 Glycine max
Glyma.08G276900 5.0kb downstream 5.0kb downstream 19179 true Chr08: 37016860-37036038 Glycine max
Glyma.08G276900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 37031039-37036038 Glycine max
Glyma.08G276900 10.0kb upstream 10.0kb upstream 24179 true Chr08: 37006860-37031038 Glycine max
Glyma.08G276900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 37006860-37016859 Glycine max
Glyma.08G276900 10.0kb downstream 10.0kb downstream 24179 true Chr08: 37016860-37041038 Glycine max
Glyma.08G276900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 37031039-37041038 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026352 5273 Angiosperm View MSA
122305535 5265 Fabidae View MSA
124064723 5270 Rosid View MSA
123738926 5271 Pentapetalae View MSA
122787956 5272 Eudicot View MSA
121345763 5274 Embryophyte View MSA
123427917 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.14062 0.0 24.2857    
cufflinks 6.46539 0.0 25.4691    
cufflinks 3.67824 0.0 17.319    
cufflinks 5.42934 0.0 22.1867    
cufflinks 3.33144 0.0 15.6967    
cufflinks 3.40796 0.0 16.3083    
cufflinks 8.99606 0.0 31.6889   High
cufflinks 4.58917 0.0 20.2414    
cufflinks 3.32458 0.0 12.0714   Low
cufflinks 0.171        
cufflinks 0.09       Low
cufflinks 0.172        
cufflinks 0.104        
cufflinks 0.108        
cufflinks 0.174        
cufflinks 0.272        
cufflinks 0.071       Low
cufflinks 0.193        
cufflinks 0.273        
cufflinks 0.3       High
cufflinks 0.118        
cufflinks 0.296       High
cufflinks 0.347       High
cufflinks 0.112        
cufflinks 0.3       High
cufflinks 0.099       Low

0 Strain