Gene : Glyma.08G250800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Genomic Order:  2508
Name:  ? Glyma.08G250800 Secondary Identifier:  ? PAC:30535556
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G250800 0.5kb upstream 0.5kb upstream 12749 true Chr08: 21974676-21987424 Glycine max
Glyma.08G250800 0.5kb upstream 0.5kb upstream 500 false Chr08: 21974676-21975175 Glycine max
Glyma.08G250800 0.5kb downstream 0.5kb downstream 12749 true Chr08: 21975176-21987924 Glycine max
Glyma.08G250800 0.5kb downstream 0.5kb downstream 500 false Chr08: 21987425-21987924 Glycine max
Glyma.08G250800 1.0kb upstream 1.0kb upstream 13249 true Chr08: 21974176-21987424 Glycine max
Glyma.08G250800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21974176-21975175 Glycine max
Glyma.08G250800 1.0kb downstream 1.0kb downstream 13249 true Chr08: 21975176-21988424 Glycine max
Glyma.08G250800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21987425-21988424 Glycine max
Glyma.08G250800 2.0kb upstream 2.0kb upstream 14249 true Chr08: 21973176-21987424 Glycine max
Glyma.08G250800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21973176-21975175 Glycine max
Glyma.08G250800 2.0kb downstream 2.0kb downstream 14249 true Chr08: 21975176-21989424 Glycine max
Glyma.08G250800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21987425-21989424 Glycine max
Glyma.08G250800 5.0kb upstream 5.0kb upstream 17249 true Chr08: 21970176-21987424 Glycine max
Glyma.08G250800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21970176-21975175 Glycine max
Glyma.08G250800 5.0kb downstream 5.0kb downstream 17249 true Chr08: 21975176-21992424 Glycine max
Glyma.08G250800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21987425-21992424 Glycine max
Glyma.08G250800 10.0kb upstream 10.0kb upstream 22249 true Chr08: 21965176-21987424 Glycine max
Glyma.08G250800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21965176-21975175 Glycine max
Glyma.08G250800 10.0kb downstream 10.0kb downstream 22249 true Chr08: 21975176-21997424 Glycine max
Glyma.08G250800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21987425-21997424 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122314774 5265 Fabidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.621393 0.0 4.32276    
cufflinks 0.131904 0.0 1.18407 Low  
cufflinks 0.548684 0.0 2.71316    
cufflinks 0.408789 0.0 1.985    
cufflinks 0.58725 0.0 4.01135    
cufflinks 0.0416943 0.0 0.185855 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0378755 0.0 0.161928 Low Low
cufflinks 0.391522 0.0 1.93404    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076        
cufflinks 0.051     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.066     Low  
cufflinks 0.113        
cufflinks 0.036     Low  
cufflinks 0.002     Low Low
cufflinks 0.066     Low  
cufflinks 0.063        
cufflinks 0.036     Low  
cufflinks 0.021     Low  
cufflinks 0.062        
cufflinks 0.051     Low  
cufflinks 0.07        

0 Strain