Gene : Glyma.08G247700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10992:SF872 - METHYLESTERASE 13, CHLOROPLASTIC-RELATED Genomic Order:  2477
Name:  ? Glyma.08G247700 Secondary Identifier:  ? PAC:30538700
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6303 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G247700 0.5kb upstream 0.5kb upstream 5756 true Chr08: 21505702-21511457 Glycine max
Glyma.08G247700 0.5kb upstream 0.5kb upstream 500 false Chr08: 21505702-21506201 Glycine max
Glyma.08G247700 0.5kb downstream 0.5kb downstream 5756 true Chr08: 21506202-21511957 Glycine max
Glyma.08G247700 0.5kb downstream 0.5kb downstream 500 false Chr08: 21511458-21511957 Glycine max
Glyma.08G247700 1.0kb upstream 1.0kb upstream 6256 true Chr08: 21505202-21511457 Glycine max
Glyma.08G247700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 21505202-21506201 Glycine max
Glyma.08G247700 1.0kb downstream 1.0kb downstream 6256 true Chr08: 21506202-21512457 Glycine max
Glyma.08G247700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 21511458-21512457 Glycine max
Glyma.08G247700 2.0kb upstream 2.0kb upstream 7256 true Chr08: 21504202-21511457 Glycine max
Glyma.08G247700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 21504202-21506201 Glycine max
Glyma.08G247700 2.0kb downstream 2.0kb downstream 7256 true Chr08: 21506202-21513457 Glycine max
Glyma.08G247700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 21511458-21513457 Glycine max
Glyma.08G247700 5.0kb upstream 5.0kb upstream 10256 true Chr08: 21501202-21511457 Glycine max
Glyma.08G247700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 21501202-21506201 Glycine max
Glyma.08G247700 5.0kb downstream 5.0kb downstream 10256 true Chr08: 21506202-21516457 Glycine max
Glyma.08G247700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 21511458-21516457 Glycine max
Glyma.08G247700 10.0kb upstream 10.0kb upstream 15256 true Chr08: 21496202-21511457 Glycine max
Glyma.08G247700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 21496202-21506201 Glycine max
Glyma.08G247700 10.0kb downstream 10.0kb downstream 15256 true Chr08: 21506202-21521457 Glycine max
Glyma.08G247700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 21511458-21521457 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306372 5265 Fabidae View MSA
124062641 5270 Rosid View MSA
123745727 5271 Pentapetalae View MSA
122786320 5272 Eudicot View MSA
122047240 5273 Angiosperm View MSA
121348748 5274 Embryophyte View MSA
123426330 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.35858 0.0 22.9958    
cufflinks 3.35512 0.0 10.2731    
cufflinks 8.96949 0.0 24.5321   High
cufflinks 7.52234 0.0 20.8729    
cufflinks 3.23107 0.0 9.93974    
cufflinks 5.93546 0.0 16.8485    
cufflinks 6.46282 0.0 18.2103    
cufflinks 4.90022 0.0 14.2457    
cufflinks 2.04165 0.0 6.69667   Low
cufflinks 2.198        
cufflinks 3.51       High
cufflinks 2.285        
cufflinks 1.232        
cufflinks 1.195        
cufflinks 0.491       Low
cufflinks 0.845        
cufflinks 0.852        
cufflinks 1.703        
cufflinks 1.231        
cufflinks 0.75        
cufflinks 3.039       High
cufflinks 0.853        
cufflinks 1.122        
cufflinks 5.188       High
cufflinks 0.78        
cufflinks 2.535        

0 Strain