Gene : Glyma.08G201600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11909//PTHR11909:SF169 - CASEIN KINASE-RELATED Genomic Order:  2016
Name:  ? Glyma.08G201600 Secondary Identifier:  ? PAC:30538468
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G201600 0.5kb upstream 0.5kb upstream 6414 true Chr08: 16334022-16340435 Glycine max
Glyma.08G201600 0.5kb upstream 0.5kb upstream 500 false Chr08: 16339936-16340435 Glycine max
Glyma.08G201600 0.5kb downstream 0.5kb downstream 6414 true Chr08: 16333522-16339935 Glycine max
Glyma.08G201600 0.5kb downstream 0.5kb downstream 500 false Chr08: 16333522-16334021 Glycine max
Glyma.08G201600 1.0kb upstream 1.0kb upstream 6914 true Chr08: 16334022-16340935 Glycine max
Glyma.08G201600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16339936-16340935 Glycine max
Glyma.08G201600 1.0kb downstream 1.0kb downstream 6914 true Chr08: 16333022-16339935 Glycine max
Glyma.08G201600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16333022-16334021 Glycine max
Glyma.08G201600 2.0kb upstream 2.0kb upstream 7914 true Chr08: 16334022-16341935 Glycine max
Glyma.08G201600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16339936-16341935 Glycine max
Glyma.08G201600 2.0kb downstream 2.0kb downstream 7914 true Chr08: 16332022-16339935 Glycine max
Glyma.08G201600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16332022-16334021 Glycine max
Glyma.08G201600 5.0kb upstream 5.0kb upstream 10914 true Chr08: 16334022-16344935 Glycine max
Glyma.08G201600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16339936-16344935 Glycine max
Glyma.08G201600 5.0kb downstream 5.0kb downstream 10914 true Chr08: 16329022-16339935 Glycine max
Glyma.08G201600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16329022-16334021 Glycine max
Glyma.08G201600 10.0kb upstream 10.0kb upstream 15914 true Chr08: 16334022-16349935 Glycine max
Glyma.08G201600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16339936-16349935 Glycine max
Glyma.08G201600 10.0kb downstream 10.0kb downstream 15914 true Chr08: 16324022-16339935 Glycine max
Glyma.08G201600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16324022-16334021 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301457 5265 Fabidae View MSA
124069756 5270 Rosid View MSA
123746261 5271 Pentapetalae View MSA
122793480 5272 Eudicot View MSA
122042474 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.62963 0.0 20.447    
cufflinks 6.98916 0.0 18.8077    
cufflinks 6.91105 0.0 18.5903    
cufflinks 8.78789 0.0 23.4752    
cufflinks 7.87336 0.0 21.0778    
cufflinks 5.07544 0.0 13.8896   Low
cufflinks 11.2596 0.0 30.0534   High
cufflinks 7.1215 0.0 19.1472    
cufflinks 7.69208 0.0 20.622    
cufflinks 3.89        
cufflinks 3.433       Low
cufflinks 4.959       High
cufflinks 4.622        
cufflinks 4.372        
cufflinks 3.429       Low
cufflinks 4.317        
cufflinks 3.849        
cufflinks 4.994       High
cufflinks 5.933       High
cufflinks 3.443       Low
cufflinks 3.73        
cufflinks 4.378        
cufflinks 4.504        
cufflinks 3.985        
cufflinks 3.242       Low
cufflinks 5.092       High

0 Strain