Gene : Glyma.08G188200 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.4.7 - Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase Genomic Order:  1882
Name:  ? Glyma.08G188200 Secondary Identifier:  ? PAC:30536033
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6890 Glycine max pathologic  
Gmax PWY-6908 Glycine max pathologic  
Gmax PWY-6910 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G188200 0.5kb upstream 0.5kb upstream 5890 true Chr08: 15097868-15103757 Glycine max
Glyma.08G188200 0.5kb upstream 0.5kb upstream 500 false Chr08: 15097868-15098367 Glycine max
Glyma.08G188200 0.5kb downstream 0.5kb downstream 5890 true Chr08: 15098368-15104257 Glycine max
Glyma.08G188200 0.5kb downstream 0.5kb downstream 500 false Chr08: 15103758-15104257 Glycine max
Glyma.08G188200 1.0kb upstream 1.0kb upstream 6390 true Chr08: 15097368-15103757 Glycine max
Glyma.08G188200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15097368-15098367 Glycine max
Glyma.08G188200 1.0kb downstream 1.0kb downstream 6390 true Chr08: 15098368-15104757 Glycine max
Glyma.08G188200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15103758-15104757 Glycine max
Glyma.08G188200 2.0kb upstream 2.0kb upstream 7390 true Chr08: 15096368-15103757 Glycine max
Glyma.08G188200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15096368-15098367 Glycine max
Glyma.08G188200 2.0kb downstream 2.0kb downstream 7390 true Chr08: 15098368-15105757 Glycine max
Glyma.08G188200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15103758-15105757 Glycine max
Glyma.08G188200 5.0kb upstream 5.0kb upstream 10390 true Chr08: 15093368-15103757 Glycine max
Glyma.08G188200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15093368-15098367 Glycine max
Glyma.08G188200 5.0kb downstream 5.0kb downstream 10390 true Chr08: 15098368-15108757 Glycine max
Glyma.08G188200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15103758-15108757 Glycine max
Glyma.08G188200 10.0kb upstream 10.0kb upstream 15390 true Chr08: 15088368-15103757 Glycine max
Glyma.08G188200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15088368-15098367 Glycine max
Glyma.08G188200 10.0kb downstream 10.0kb downstream 15390 true Chr08: 15098368-15113757 Glycine max
Glyma.08G188200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15103758-15113757 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309007 5265 Fabidae View MSA
124063802 5270 Rosid View MSA
123739977 5271 Pentapetalae View MSA
122792526 5272 Eudicot View MSA
122045389 5273 Angiosperm View MSA
121344045 5274 Embryophyte View MSA
123424693 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5967 0.0 33.733   High
cufflinks 8.01129 0.0 21.9459    
cufflinks 12.7013 0.0 33.9786   High
cufflinks 9.60349 0.0 26.0102    
cufflinks 10.6486 0.0 28.6903    
cufflinks 10.376 0.0 27.9722    
cufflinks 6.65576 0.0 18.5075   Low
cufflinks 9.80776 0.0 26.5224    
cufflinks 7.12689 0.0 19.6822   Low
cufflinks 2.992        
cufflinks 1.898        
cufflinks 4.005        
cufflinks 4.579        
cufflinks 5.858       High
cufflinks 0.759       Low
cufflinks 5.139        
cufflinks 2.64        
cufflinks 3.27        
cufflinks 4.174        
cufflinks 5.069        
cufflinks 1.89        
cufflinks 4.805        
cufflinks 5.945       High
cufflinks 2.128        
cufflinks 5.615        
cufflinks 2.133        

0 Strain