Gene : Glyma.08G170000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23115//PTHR23115:SF136 - TRANSLATION FACTOR Genomic Order:  1700
Name:  ? Glyma.08G170000 Secondary Identifier:  ? PAC:30536430
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G170000 0.5kb upstream 0.5kb upstream 4786 true Chr08: 13532683-13537468 Glycine max
Glyma.08G170000 0.5kb upstream 0.5kb upstream 500 false Chr08: 13532683-13533182 Glycine max
Glyma.08G170000 0.5kb downstream 0.5kb downstream 4786 true Chr08: 13533183-13537968 Glycine max
Glyma.08G170000 0.5kb downstream 0.5kb downstream 500 false Chr08: 13537469-13537968 Glycine max
Glyma.08G170000 1.0kb upstream 1.0kb upstream 5286 true Chr08: 13532183-13537468 Glycine max
Glyma.08G170000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13532183-13533182 Glycine max
Glyma.08G170000 1.0kb downstream 1.0kb downstream 5286 true Chr08: 13533183-13538468 Glycine max
Glyma.08G170000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13537469-13538468 Glycine max
Glyma.08G170000 2.0kb upstream 2.0kb upstream 6286 true Chr08: 13531183-13537468 Glycine max
Glyma.08G170000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13531183-13533182 Glycine max
Glyma.08G170000 2.0kb downstream 2.0kb downstream 6286 true Chr08: 13533183-13539468 Glycine max
Glyma.08G170000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13537469-13539468 Glycine max
Glyma.08G170000 5.0kb upstream 5.0kb upstream 9286 true Chr08: 13528183-13537468 Glycine max
Glyma.08G170000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13528183-13533182 Glycine max
Glyma.08G170000 5.0kb downstream 5.0kb downstream 9286 true Chr08: 13533183-13542468 Glycine max
Glyma.08G170000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13537469-13542468 Glycine max
Glyma.08G170000 10.0kb upstream 10.0kb upstream 14286 true Chr08: 13523183-13537468 Glycine max
Glyma.08G170000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13523183-13533182 Glycine max
Glyma.08G170000 10.0kb downstream 10.0kb downstream 14286 true Chr08: 13533183-13547468 Glycine max
Glyma.08G170000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13537469-13547468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311819 5265 Fabidae View MSA
124068055 5270 Rosid View MSA
123747688 5271 Pentapetalae View MSA
122790128 5272 Eudicot View MSA
122043723 5273 Angiosperm View MSA
121349884 5274 Embryophyte View MSA
123428613 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 242.677 0.0 1151.69 High  
cufflinks 250.294 0.0 2808.59 High  
cufflinks 160.506 0.0 664.043 High Low
cufflinks 190.035 0.0 827.661 High  
cufflinks 396.509 0.0 6712.21 High High
cufflinks 256.072 0.0 1242.45 High  
cufflinks 400.007 0.0 2325.7 High High
cufflinks 207.29 0.0 1993.69 High  
cufflinks 265.344 0.0 3124.34 High  
cufflinks 93.065     High  
cufflinks 35.009     High Low
cufflinks 72.93     High  
cufflinks 176.163     High High
cufflinks 232.572     High High
cufflinks 43.628     High Low
cufflinks 74.538     High  
cufflinks 62.723     High  
cufflinks 84.602     High  
cufflinks 107.462     High  
cufflinks 66.39     High  
cufflinks 48.678     High  
cufflinks 67.934     High  
cufflinks 70.829     High  
cufflinks 48.761     High  
cufflinks 72.489     High  
cufflinks 55.686     High  

0 Strain