Gene : Glyma.08G169900 G. max Wm82.a2.v1
Defline:  (1 of 28) 1.14.11.20 - Deacetoxyvindoline 4-hydroxylase / Desacetyoxyvindoline-17-hydroxylase Genomic Order:  1699
Name:  ? Glyma.08G169900 Secondary Identifier:  ? PAC:30536537
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G169900 0.5kb upstream 0.5kb upstream 3478 true Chr08: 13526528-13530005 Glycine max
Glyma.08G169900 0.5kb upstream 0.5kb upstream 500 false Chr08: 13529506-13530005 Glycine max
Glyma.08G169900 0.5kb downstream 0.5kb downstream 3478 true Chr08: 13526028-13529505 Glycine max
Glyma.08G169900 0.5kb downstream 0.5kb downstream 500 false Chr08: 13526028-13526527 Glycine max
Glyma.08G169900 1.0kb upstream 1.0kb upstream 3978 true Chr08: 13526528-13530505 Glycine max
Glyma.08G169900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13529506-13530505 Glycine max
Glyma.08G169900 1.0kb downstream 1.0kb downstream 3978 true Chr08: 13525528-13529505 Glycine max
Glyma.08G169900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13525528-13526527 Glycine max
Glyma.08G169900 2.0kb upstream 2.0kb upstream 4978 true Chr08: 13526528-13531505 Glycine max
Glyma.08G169900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13529506-13531505 Glycine max
Glyma.08G169900 2.0kb downstream 2.0kb downstream 4978 true Chr08: 13524528-13529505 Glycine max
Glyma.08G169900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13524528-13526527 Glycine max
Glyma.08G169900 5.0kb upstream 5.0kb upstream 7978 true Chr08: 13526528-13534505 Glycine max
Glyma.08G169900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13529506-13534505 Glycine max
Glyma.08G169900 5.0kb downstream 5.0kb downstream 7978 true Chr08: 13521528-13529505 Glycine max
Glyma.08G169900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13521528-13526527 Glycine max
Glyma.08G169900 10.0kb upstream 10.0kb upstream 12978 true Chr08: 13526528-13539505 Glycine max
Glyma.08G169900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13529506-13539505 Glycine max
Glyma.08G169900 10.0kb downstream 10.0kb downstream 12978 true Chr08: 13516528-13529505 Glycine max
Glyma.08G169900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13516528-13526527 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658583 5273 Angiosperm View MSA
122298822 5265 Fabidae View MSA
124042660 5270 Rosid View MSA
123612871 5271 Pentapetalae View MSA
122647352 5272 Eudicot View MSA
120930556 5274 Embryophyte View MSA
122971054 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.141532 0.0 0.559143 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0262774 0.0 0.11686 Low Low
cufflinks 0.665898 0.0 4.26093    
cufflinks 1.58358 0.0 10.2259    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.254004 0.0 1.8045    
cufflinks 4.92081 0.0 22.1302   High
cufflinks 0.02     Low  
cufflinks 1.616       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.42        
cufflinks 0.467        
cufflinks 0.908        
cufflinks 0.006     Low  
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.008     Low  
cufflinks 1.525       High
cufflinks 0.004     Low Low
cufflinks 0.01     Low  
cufflinks 1.393       High
cufflinks 0.004     Low Low
cufflinks 0.558        

0 Strain