Gene : Glyma.08G128500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10366//PTHR10366:SF326 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  1285
Name:  ? Glyma.08G128500 Secondary Identifier:  ? PAC:30540201
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-63 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G128500 0.5kb upstream 0.5kb upstream 6771 true Chr08: 9900894-9907664 Glycine max
Glyma.08G128500 0.5kb upstream 0.5kb upstream 500 false Chr08: 9900894-9901393 Glycine max
Glyma.08G128500 0.5kb downstream 0.5kb downstream 6771 true Chr08: 9901394-9908164 Glycine max
Glyma.08G128500 0.5kb downstream 0.5kb downstream 500 false Chr08: 9907665-9908164 Glycine max
Glyma.08G128500 1.0kb upstream 1.0kb upstream 7271 true Chr08: 9900394-9907664 Glycine max
Glyma.08G128500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9900394-9901393 Glycine max
Glyma.08G128500 1.0kb downstream 1.0kb downstream 7271 true Chr08: 9901394-9908664 Glycine max
Glyma.08G128500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9907665-9908664 Glycine max
Glyma.08G128500 2.0kb upstream 2.0kb upstream 8271 true Chr08: 9899394-9907664 Glycine max
Glyma.08G128500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9899394-9901393 Glycine max
Glyma.08G128500 2.0kb downstream 2.0kb downstream 8271 true Chr08: 9901394-9909664 Glycine max
Glyma.08G128500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9907665-9909664 Glycine max
Glyma.08G128500 5.0kb upstream 5.0kb upstream 11271 true Chr08: 9896394-9907664 Glycine max
Glyma.08G128500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9896394-9901393 Glycine max
Glyma.08G128500 5.0kb downstream 5.0kb downstream 11271 true Chr08: 9901394-9912664 Glycine max
Glyma.08G128500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9907665-9912664 Glycine max
Glyma.08G128500 10.0kb upstream 10.0kb upstream 16271 true Chr08: 9891394-9907664 Glycine max
Glyma.08G128500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9891394-9901393 Glycine max
Glyma.08G128500 10.0kb downstream 10.0kb downstream 16271 true Chr08: 9901394-9917664 Glycine max
Glyma.08G128500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9907665-9917664 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314330 5265 Fabidae View MSA
124063574 5270 Rosid View MSA
123743067 5271 Pentapetalae View MSA
122788124 5272 Eudicot View MSA
122043632 5273 Angiosperm View MSA
121349554 5274 Embryophyte View MSA
123428633 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.36038 0.0 5.29738   Low
cufflinks 6.5907 0.0 24.5509    
cufflinks 4.02863 0.0 14.4684    
cufflinks 8.312 0.0 29.6623    
cufflinks 4.69553 0.0 19.1311    
cufflinks 21.7761 0.0 74.8935   High
cufflinks 6.08857 0.0 19.9588    
cufflinks 7.18318 0.0 26.344    
cufflinks 4.26863 0.0 17.9019    
cufflinks 0.765        
cufflinks 0.319        
cufflinks 1.268       High
cufflinks 0.941        
cufflinks 0.82        
cufflinks 0.439        
cufflinks 0.431        
cufflinks 0.847        
cufflinks 3.191       High
cufflinks 0.958        
cufflinks 0.271       Low
cufflinks 0.391        
cufflinks 0.369        
cufflinks 0.516        
cufflinks 0.209       Low
cufflinks 0.334        
cufflinks 0.72        

0 Strain