Gene : Glyma.08G130500 G. max Wm82.a2.v1
Defline:  (1 of 21) PF14576//PF14577 - Sieve element occlusion N-terminus (SEO_N) // Sieve element occlusion C-terminus (SEO_C) Genomic Order:  1305
Name:  ? Glyma.08G130500 Secondary Identifier:  ? PAC:30536493
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G130500 0.5kb upstream 0.5kb upstream 4636 true Chr08: 10019617-10024252 Glycine max
Glyma.08G130500 0.5kb upstream 0.5kb upstream 500 false Chr08: 10023753-10024252 Glycine max
Glyma.08G130500 0.5kb downstream 0.5kb downstream 4636 true Chr08: 10019117-10023752 Glycine max
Glyma.08G130500 0.5kb downstream 0.5kb downstream 500 false Chr08: 10019117-10019616 Glycine max
Glyma.08G130500 1.0kb upstream 1.0kb upstream 5136 true Chr08: 10019617-10024752 Glycine max
Glyma.08G130500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10023753-10024752 Glycine max
Glyma.08G130500 1.0kb downstream 1.0kb downstream 5136 true Chr08: 10018617-10023752 Glycine max
Glyma.08G130500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10018617-10019616 Glycine max
Glyma.08G130500 2.0kb upstream 2.0kb upstream 6136 true Chr08: 10019617-10025752 Glycine max
Glyma.08G130500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10023753-10025752 Glycine max
Glyma.08G130500 2.0kb downstream 2.0kb downstream 6136 true Chr08: 10017617-10023752 Glycine max
Glyma.08G130500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10017617-10019616 Glycine max
Glyma.08G130500 5.0kb upstream 5.0kb upstream 9136 true Chr08: 10019617-10028752 Glycine max
Glyma.08G130500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10023753-10028752 Glycine max
Glyma.08G130500 5.0kb downstream 5.0kb downstream 9136 true Chr08: 10014617-10023752 Glycine max
Glyma.08G130500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10014617-10019616 Glycine max
Glyma.08G130500 10.0kb upstream 10.0kb upstream 14136 true Chr08: 10019617-10033752 Glycine max
Glyma.08G130500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10023753-10033752 Glycine max
Glyma.08G130500 10.0kb downstream 10.0kb downstream 14136 true Chr08: 10009617-10023752 Glycine max
Glyma.08G130500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10009617-10019616 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297511 5265 Fabidae View MSA
124073104 5270 Rosid View MSA
123748398 5271 Pentapetalae View MSA
122794596 5272 Eudicot View MSA
122046190 5273 Angiosperm View MSA
121310572 5274 Embryophyte View MSA
123348022 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.91091 0.0 6.00194    
cufflinks 1.70319 0.0 5.44719    
cufflinks 1.64817 0.0 5.28133    
cufflinks 1.90315 0.0 5.98037    
cufflinks 1.12991 0.0 3.8112    
cufflinks 0.379289 0.0 1.39471   Low
cufflinks 2.21767 0.0 6.82053    
cufflinks 2.5328 0.0 7.63492    
cufflinks 1.3479 0.0 4.4466    
cufflinks 5.957       High
cufflinks 0.871        
cufflinks 2.388        
cufflinks 1.521        
cufflinks 0.356       Low
cufflinks 0.074       Low
cufflinks 3.75        
cufflinks 1.014        
cufflinks 6.499       High
cufflinks 1.062        
cufflinks 4.665        
cufflinks 1.354        
cufflinks 4.709        
cufflinks 3.147        
cufflinks 0.596        
cufflinks 4.003        
cufflinks 1.614        

0 Strain