Gene : Glyma.08G071200 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR19241//PTHR19241:SF301 - ATP-BINDING CASSETTE TRANSPORTER Genomic Order:  712
Name:  ? Glyma.08G071200 Secondary Identifier:  ? PAC:30538657
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G071200 0.5kb upstream 0.5kb upstream 7888 true Chr08: 5438763-5446650 Glycine max
Glyma.08G071200 0.5kb upstream 0.5kb upstream 500 false Chr08: 5446151-5446650 Glycine max
Glyma.08G071200 0.5kb downstream 0.5kb downstream 7888 true Chr08: 5438263-5446150 Glycine max
Glyma.08G071200 0.5kb downstream 0.5kb downstream 500 false Chr08: 5438263-5438762 Glycine max
Glyma.08G071200 1.0kb upstream 1.0kb upstream 8388 true Chr08: 5438763-5447150 Glycine max
Glyma.08G071200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5446151-5447150 Glycine max
Glyma.08G071200 1.0kb downstream 1.0kb downstream 8388 true Chr08: 5437763-5446150 Glycine max
Glyma.08G071200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5437763-5438762 Glycine max
Glyma.08G071200 2.0kb upstream 2.0kb upstream 9388 true Chr08: 5438763-5448150 Glycine max
Glyma.08G071200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5446151-5448150 Glycine max
Glyma.08G071200 2.0kb downstream 2.0kb downstream 9388 true Chr08: 5436763-5446150 Glycine max
Glyma.08G071200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5436763-5438762 Glycine max
Glyma.08G071200 5.0kb upstream 5.0kb upstream 12388 true Chr08: 5438763-5451150 Glycine max
Glyma.08G071200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5446151-5451150 Glycine max
Glyma.08G071200 5.0kb downstream 5.0kb downstream 12388 true Chr08: 5433763-5446150 Glycine max
Glyma.08G071200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5433763-5438762 Glycine max
Glyma.08G071200 10.0kb upstream 10.0kb upstream 17388 true Chr08: 5438763-5456150 Glycine max
Glyma.08G071200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5446151-5456150 Glycine max
Glyma.08G071200 10.0kb downstream 10.0kb downstream 17388 true Chr08: 5428763-5446150 Glycine max
Glyma.08G071200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5428763-5438762 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314709 5265 Fabidae View MSA
124072081 5270 Rosid View MSA
123742546 5271 Pentapetalae View MSA
122794100 5272 Eudicot View MSA
122048137 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121310859 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00921277 0.0 0.0515929 Low Low
cufflinks 0.0177988 0.0 0.0820776 Low  
cufflinks 0.13835 0.0 0.674268 Low  
cufflinks 0.40377 0.0 2.49953    
cufflinks 1.43302 0.0 11.6401    
cufflinks 0.0687836 0.0 0.274426 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0446122 0.0 0.182689 Low  
cufflinks 8.65596 0.0 33.7014   High
cufflinks 0.013     Low  
cufflinks 0.043     Low  
cufflinks 0.053     Low  
cufflinks 0.003     Low Low
cufflinks 0.005     Low  
cufflinks 0.584       High
cufflinks 0.004     Low Low
cufflinks 0.053     Low  
cufflinks 0.069     Low  
cufflinks 0.026     Low  
cufflinks 0.002     Low Low
cufflinks 0.031     Low  
cufflinks 0.002     Low Low
cufflinks 0.105       High
cufflinks 0.065        
cufflinks 0.004     Low Low
cufflinks 0.059     Low  

0 Strain