Gene : Glyma.08G076400 G. max Wm82.a2.v1
Defline:  (1 of 10) 4.1.1.22 - Histidine decarboxylase / L-histidine carboxy-lyase Genomic Order:  764
Name:  ? Glyma.08G076400 Secondary Identifier:  ? PAC:30540240
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G076400 0.5kb upstream 0.5kb upstream 4345 true Chr08: 5819582-5823926 Glycine max
Glyma.08G076400 0.5kb upstream 0.5kb upstream 500 false Chr08: 5819582-5820081 Glycine max
Glyma.08G076400 0.5kb downstream 0.5kb downstream 4345 true Chr08: 5820082-5824426 Glycine max
Glyma.08G076400 0.5kb downstream 0.5kb downstream 500 false Chr08: 5823927-5824426 Glycine max
Glyma.08G076400 1.0kb upstream 1.0kb upstream 4845 true Chr08: 5819082-5823926 Glycine max
Glyma.08G076400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5819082-5820081 Glycine max
Glyma.08G076400 1.0kb downstream 1.0kb downstream 4845 true Chr08: 5820082-5824926 Glycine max
Glyma.08G076400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5823927-5824926 Glycine max
Glyma.08G076400 2.0kb upstream 2.0kb upstream 5845 true Chr08: 5818082-5823926 Glycine max
Glyma.08G076400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5818082-5820081 Glycine max
Glyma.08G076400 2.0kb downstream 2.0kb downstream 5845 true Chr08: 5820082-5825926 Glycine max
Glyma.08G076400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5823927-5825926 Glycine max
Glyma.08G076400 5.0kb upstream 5.0kb upstream 8845 true Chr08: 5815082-5823926 Glycine max
Glyma.08G076400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5815082-5820081 Glycine max
Glyma.08G076400 5.0kb downstream 5.0kb downstream 8845 true Chr08: 5820082-5828926 Glycine max
Glyma.08G076400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5823927-5828926 Glycine max
Glyma.08G076400 10.0kb upstream 10.0kb upstream 13845 true Chr08: 5810082-5823926 Glycine max
Glyma.08G076400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5810082-5820081 Glycine max
Glyma.08G076400 10.0kb downstream 10.0kb downstream 13845 true Chr08: 5820082-5833926 Glycine max
Glyma.08G076400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5823927-5833926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315388 5265 Fabidae View MSA
124036967 5270 Rosid View MSA
123754044 5271 Pentapetalae View MSA
122775458 5272 Eudicot View MSA
122050239 5273 Angiosperm View MSA
121349588 5274 Embryophyte View MSA
123424735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61922 0.0 10.6187    
cufflinks 0.978371 0.0 6.40135    
cufflinks 13.3478 0.0 51.0978   High
cufflinks 15.4835 0.0 59.03   High
cufflinks 0.168344 0.0 1.16984 Low  
cufflinks 0.910678 0.0 3.99897    
cufflinks 0.0207757 0.0 0.0945404 Low Low
cufflinks 1.34379 0.0 8.16727    
cufflinks 1.13786 0.0 7.72759    
cufflinks 1.868        
cufflinks 0.009     Low Low
cufflinks 4.783       High
cufflinks 0.086     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.339        
cufflinks 0.032     Low  
cufflinks 5.98       High
cufflinks 0.718        
cufflinks 0.771        
cufflinks 0.042     Low  
cufflinks 1.205        
cufflinks 1.986        
cufflinks 0.004     Low Low
cufflinks 0.825        
cufflinks 0.038     Low  

0 Strain