Gene : Glyma.08G074500 G. max Wm82.a2.v1

Defline:  (1 of 11) PTHR27001:SF1 - BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1-RELATED Genomic Order:  745
Name:  ? Glyma.08G074500 Secondary Identifier:  ? PAC:30536755

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G074500 0.5kb upstream 0.5kb upstream 8250 true Chr08: 5684546-5692795 Glycine max
Glyma.08G074500 0.5kb upstream 0.5kb upstream 500 false Chr08: 5692296-5692795 Glycine max
Glyma.08G074500 0.5kb downstream 0.5kb downstream 8250 true Chr08: 5684046-5692295 Glycine max
Glyma.08G074500 0.5kb downstream 0.5kb downstream 500 false Chr08: 5684046-5684545 Glycine max
Glyma.08G074500 1.0kb upstream 1.0kb upstream 8750 true Chr08: 5684546-5693295 Glycine max
Glyma.08G074500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5692296-5693295 Glycine max
Glyma.08G074500 1.0kb downstream 1.0kb downstream 8750 true Chr08: 5683546-5692295 Glycine max
Glyma.08G074500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5683546-5684545 Glycine max
Glyma.08G074500 2.0kb upstream 2.0kb upstream 9750 true Chr08: 5684546-5694295 Glycine max
Glyma.08G074500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5692296-5694295 Glycine max
Glyma.08G074500 2.0kb downstream 2.0kb downstream 9750 true Chr08: 5682546-5692295 Glycine max
Glyma.08G074500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5682546-5684545 Glycine max
Glyma.08G074500 5.0kb upstream 5.0kb upstream 12750 true Chr08: 5684546-5697295 Glycine max
Glyma.08G074500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5692296-5697295 Glycine max
Glyma.08G074500 5.0kb downstream 5.0kb downstream 12750 true Chr08: 5679546-5692295 Glycine max
Glyma.08G074500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5679546-5684545 Glycine max
Glyma.08G074500 10.0kb upstream 10.0kb upstream 17750 true Chr08: 5684546-5702295 Glycine max
Glyma.08G074500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5692296-5702295 Glycine max
Glyma.08G074500 10.0kb downstream 10.0kb downstream 17750 true Chr08: 5674546-5692295 Glycine max
Glyma.08G074500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5674546-5684545 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027057 5273 Angiosperm View MSA
122255360 5265 Fabidae View MSA
124075417 5270 Rosid View MSA
123749975 5271 Pentapetalae View MSA
122794952 5272 Eudicot View MSA
121352379 5274 Embryophyte View MSA
123382729 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.73856 0.0 13.3784    
cufflinks 5.33227 0.0 20.8685    
cufflinks 6.42033 0.0 23.7181    
cufflinks 4.79671 0.0 19.0016    
cufflinks 3.54401 0.0 12.9059    
cufflinks 1.31705 0.0 6.77164   Low
cufflinks 1.84015 0.0 6.26622   Low
cufflinks 11.5986 0.0 40.3789   High
cufflinks 6.74694 0.0 21.19    
cufflinks 3.085       High
cufflinks 0.263       Low
cufflinks 1.815        
cufflinks 1.706        
cufflinks 0.281       Low
cufflinks 0.109       Low
cufflinks 1.212        
cufflinks 1.208        
cufflinks 2.077       High
cufflinks 1.299        
cufflinks 0.822        
cufflinks 0.391        
cufflinks 1.153        
cufflinks 1.5        
cufflinks 0.549        
cufflinks 0.876        
cufflinks 0.835        

0 Strain