Gene : Glyma.08G086900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31065:SF14 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  869
Name:  ? Glyma.08G086900 Secondary Identifier:  ? PAC:30540663
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G086900 0.5kb upstream 0.5kb upstream 5594 true Chr08: 6575924-6581517 Glycine max
Glyma.08G086900 0.5kb upstream 0.5kb upstream 500 false Chr08: 6581018-6581517 Glycine max
Glyma.08G086900 0.5kb downstream 0.5kb downstream 5594 true Chr08: 6575424-6581017 Glycine max
Glyma.08G086900 0.5kb downstream 0.5kb downstream 500 false Chr08: 6575424-6575923 Glycine max
Glyma.08G086900 1.0kb upstream 1.0kb upstream 6094 true Chr08: 6575924-6582017 Glycine max
Glyma.08G086900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6581018-6582017 Glycine max
Glyma.08G086900 1.0kb downstream 1.0kb downstream 6094 true Chr08: 6574924-6581017 Glycine max
Glyma.08G086900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6574924-6575923 Glycine max
Glyma.08G086900 2.0kb upstream 2.0kb upstream 7094 true Chr08: 6575924-6583017 Glycine max
Glyma.08G086900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6581018-6583017 Glycine max
Glyma.08G086900 2.0kb downstream 2.0kb downstream 7094 true Chr08: 6573924-6581017 Glycine max
Glyma.08G086900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6573924-6575923 Glycine max
Glyma.08G086900 5.0kb upstream 5.0kb upstream 10094 true Chr08: 6575924-6586017 Glycine max
Glyma.08G086900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6581018-6586017 Glycine max
Glyma.08G086900 5.0kb downstream 5.0kb downstream 10094 true Chr08: 6570924-6581017 Glycine max
Glyma.08G086900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6570924-6575923 Glycine max
Glyma.08G086900 10.0kb upstream 10.0kb upstream 15094 true Chr08: 6575924-6591017 Glycine max
Glyma.08G086900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6581018-6591017 Glycine max
Glyma.08G086900 10.0kb downstream 10.0kb downstream 15094 true Chr08: 6565924-6581017 Glycine max
Glyma.08G086900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6565924-6575923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298837 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.53554 0.0 27.257   High
cufflinks 0.0616715 0.0 0.254927 Low  
cufflinks 1.08948 0.0 6.81988    
cufflinks 0.708895 0.0 4.58708    
cufflinks 0.316531 0.0 1.55282    
cufflinks 1.19984 0.0 7.61232    
cufflinks 0.00541513 0.0 0.0625191 Low Low
cufflinks 0.0200959 0.0 0.105072 Low Low
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.186       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain