Gene : Glyma.08G043600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22298:SF28 - ENDOGLUCANASE 4-RELATED Genomic Order:  436
Name:  ? Glyma.08G043600 Secondary Identifier:  ? PAC:30538958
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G043600 0.5kb upstream 0.5kb upstream 5306 true Chr08: 3430640-3435945 Glycine max
Glyma.08G043600 0.5kb upstream 0.5kb upstream 500 false Chr08: 3435446-3435945 Glycine max
Glyma.08G043600 0.5kb downstream 0.5kb downstream 5306 true Chr08: 3430140-3435445 Glycine max
Glyma.08G043600 0.5kb downstream 0.5kb downstream 500 false Chr08: 3430140-3430639 Glycine max
Glyma.08G043600 1.0kb upstream 1.0kb upstream 5806 true Chr08: 3430640-3436445 Glycine max
Glyma.08G043600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3435446-3436445 Glycine max
Glyma.08G043600 1.0kb downstream 1.0kb downstream 5806 true Chr08: 3429640-3435445 Glycine max
Glyma.08G043600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3429640-3430639 Glycine max
Glyma.08G043600 2.0kb upstream 2.0kb upstream 6806 true Chr08: 3430640-3437445 Glycine max
Glyma.08G043600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3435446-3437445 Glycine max
Glyma.08G043600 2.0kb downstream 2.0kb downstream 6806 true Chr08: 3428640-3435445 Glycine max
Glyma.08G043600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3428640-3430639 Glycine max
Glyma.08G043600 5.0kb upstream 5.0kb upstream 9806 true Chr08: 3430640-3440445 Glycine max
Glyma.08G043600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3435446-3440445 Glycine max
Glyma.08G043600 5.0kb downstream 5.0kb downstream 9806 true Chr08: 3425640-3435445 Glycine max
Glyma.08G043600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3425640-3430639 Glycine max
Glyma.08G043600 10.0kb upstream 10.0kb upstream 14806 true Chr08: 3430640-3445445 Glycine max
Glyma.08G043600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3435446-3445445 Glycine max
Glyma.08G043600 10.0kb downstream 10.0kb downstream 14806 true Chr08: 3420640-3435445 Glycine max
Glyma.08G043600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3420640-3430639 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299426 5265 Fabidae View MSA
124074876 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.128568 0.0 0.503027 Low Low
cufflinks 13.7628 0.0 36.8251    
cufflinks 1.57305 0.0 5.32719    
cufflinks 8.12801 0.0 22.3261    
cufflinks 12.1549 0.0 32.56    
cufflinks 2.98799 0.0 9.18001    
cufflinks 2.93214 0.0 9.01417    
cufflinks 55.7966 0.0 160.519 High High
cufflinks 12.1953 0.0 32.7039    
cufflinks 3.543        
cufflinks 0.197       Low
cufflinks 1.562        
cufflinks 2.061        
cufflinks 2.866        
cufflinks 0.158       Low
cufflinks 2.949        
cufflinks 1.726        
cufflinks 2.049        
cufflinks 6.079       High
cufflinks 2.666        
cufflinks 0.357       Low
cufflinks 2.722        
cufflinks 4.091        
cufflinks 0.17       Low
cufflinks 2.279        
cufflinks 0.585        

0 Strain