Gene : Glyma.08G058300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19957//PTHR19957:SF125 - SYNTAXIN Genomic Order:  583
Name:  ? Glyma.08G058300 Secondary Identifier:  ? PAC:30537946
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G058300 0.5kb upstream 0.5kb upstream 2475 true Chr08: 4469961-4472435 Glycine max
Glyma.08G058300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4471936-4472435 Glycine max
Glyma.08G058300 0.5kb downstream 0.5kb downstream 2475 true Chr08: 4469461-4471935 Glycine max
Glyma.08G058300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4469461-4469960 Glycine max
Glyma.08G058300 1.0kb upstream 1.0kb upstream 2975 true Chr08: 4469961-4472935 Glycine max
Glyma.08G058300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4471936-4472935 Glycine max
Glyma.08G058300 1.0kb downstream 1.0kb downstream 2975 true Chr08: 4468961-4471935 Glycine max
Glyma.08G058300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4468961-4469960 Glycine max
Glyma.08G058300 2.0kb upstream 2.0kb upstream 3975 true Chr08: 4469961-4473935 Glycine max
Glyma.08G058300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4471936-4473935 Glycine max
Glyma.08G058300 2.0kb downstream 2.0kb downstream 3975 true Chr08: 4467961-4471935 Glycine max
Glyma.08G058300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4467961-4469960 Glycine max
Glyma.08G058300 5.0kb upstream 5.0kb upstream 6975 true Chr08: 4469961-4476935 Glycine max
Glyma.08G058300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4471936-4476935 Glycine max
Glyma.08G058300 5.0kb downstream 5.0kb downstream 6975 true Chr08: 4464961-4471935 Glycine max
Glyma.08G058300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4464961-4469960 Glycine max
Glyma.08G058300 10.0kb upstream 10.0kb upstream 11975 true Chr08: 4469961-4481935 Glycine max
Glyma.08G058300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4471936-4481935 Glycine max
Glyma.08G058300 10.0kb downstream 10.0kb downstream 11975 true Chr08: 4459961-4471935 Glycine max
Glyma.08G058300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4459961-4469960 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310786 5265 Fabidae View MSA
124063284 5270 Rosid View MSA
123751525 5271 Pentapetalae View MSA
122791702 5272 Eudicot View MSA
122045284 5273 Angiosperm View MSA
121350681 5274 Embryophyte View MSA
123426868 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0102166 0.0 0.0462048 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.49988 0.0 4.99795   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0101708 0.0 0.0460324 Low  
cufflinks 0.0310439 0.0 0.128504 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.392       High
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.131        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain