Gene : Glyma.08G027900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34944:SF2 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7-1-RELATED Genomic Order:  279
Name:  ? Glyma.08G027900 Secondary Identifier:  ? PAC:30539200
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G027900 0.5kb upstream 0.5kb upstream 1213 true Chr08: 2238240-2239452 Glycine max
Glyma.08G027900 0.5kb upstream 0.5kb upstream 500 false Chr08: 2238953-2239452 Glycine max
Glyma.08G027900 0.5kb downstream 0.5kb downstream 1213 true Chr08: 2237740-2238952 Glycine max
Glyma.08G027900 0.5kb downstream 0.5kb downstream 500 false Chr08: 2237740-2238239 Glycine max
Glyma.08G027900 1.0kb upstream 1.0kb upstream 1713 true Chr08: 2238240-2239952 Glycine max
Glyma.08G027900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2238953-2239952 Glycine max
Glyma.08G027900 1.0kb downstream 1.0kb downstream 1713 true Chr08: 2237240-2238952 Glycine max
Glyma.08G027900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2237240-2238239 Glycine max
Glyma.08G027900 2.0kb upstream 2.0kb upstream 2713 true Chr08: 2238240-2240952 Glycine max
Glyma.08G027900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2238953-2240952 Glycine max
Glyma.08G027900 2.0kb downstream 2.0kb downstream 2713 true Chr08: 2236240-2238952 Glycine max
Glyma.08G027900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2236240-2238239 Glycine max
Glyma.08G027900 5.0kb upstream 5.0kb upstream 5713 true Chr08: 2238240-2243952 Glycine max
Glyma.08G027900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2238953-2243952 Glycine max
Glyma.08G027900 5.0kb downstream 5.0kb downstream 5713 true Chr08: 2233240-2238952 Glycine max
Glyma.08G027900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2233240-2238239 Glycine max
Glyma.08G027900 10.0kb upstream 10.0kb upstream 10713 true Chr08: 2238240-2248952 Glycine max
Glyma.08G027900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2238953-2248952 Glycine max
Glyma.08G027900 10.0kb downstream 10.0kb downstream 10713 true Chr08: 2228240-2238952 Glycine max
Glyma.08G027900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2228240-2238239 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026328 5273 Angiosperm View MSA
122306248 5265 Fabidae View MSA
124066151 5270 Rosid View MSA
123736497 5271 Pentapetalae View MSA
122792009 5272 Eudicot View MSA
121350296 5274 Embryophyte View MSA
123427589 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.8657 0.0 194.55 High  
cufflinks 89.2775 0.0 239.466 High  
cufflinks 53.3972 0.0 142.707 High Low
cufflinks 61.3568 0.0 163.703 High Low
cufflinks 131.453 0.0 361.917 High High
cufflinks 115.256 0.0 313.755 High  
cufflinks 125.941 0.0 344.811 High High
cufflinks 102.383 0.0 276.349 High  
cufflinks 98.8702 0.0 266.584 High  
cufflinks 73.162     High  
cufflinks 29.696     High Low
cufflinks 47.075     High  
cufflinks 110.557     High High
cufflinks 165.279     High High
cufflinks 23.084     High Low
cufflinks 47.908     High  
cufflinks 52.293     High  
cufflinks 51.064     High  
cufflinks 79.704     High  
cufflinks 34.374     High  
cufflinks 35.22     High  
cufflinks 41.192     High  
cufflinks 60.207     High  
cufflinks 40.315     High  
cufflinks 40.262     High  
cufflinks 53.993     High  

0 Strain