Gene : Glyma.08G033000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31321:SF17 - PECTINESTERASE 53-RELATED Genomic Order:  330
Name:  ? Glyma.08G033000 Secondary Identifier:  ? PAC:30539029
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G033000 0.5kb upstream 0.5kb upstream 4129 true Chr08: 2627678-2631806 Glycine max
Glyma.08G033000 0.5kb upstream 0.5kb upstream 500 false Chr08: 2627678-2628177 Glycine max
Glyma.08G033000 0.5kb downstream 0.5kb downstream 4129 true Chr08: 2628178-2632306 Glycine max
Glyma.08G033000 0.5kb downstream 0.5kb downstream 500 false Chr08: 2631807-2632306 Glycine max
Glyma.08G033000 1.0kb upstream 1.0kb upstream 4629 true Chr08: 2627178-2631806 Glycine max
Glyma.08G033000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2627178-2628177 Glycine max
Glyma.08G033000 1.0kb downstream 1.0kb downstream 4629 true Chr08: 2628178-2632806 Glycine max
Glyma.08G033000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2631807-2632806 Glycine max
Glyma.08G033000 2.0kb upstream 2.0kb upstream 5629 true Chr08: 2626178-2631806 Glycine max
Glyma.08G033000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2626178-2628177 Glycine max
Glyma.08G033000 2.0kb downstream 2.0kb downstream 5629 true Chr08: 2628178-2633806 Glycine max
Glyma.08G033000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2631807-2633806 Glycine max
Glyma.08G033000 5.0kb upstream 5.0kb upstream 8629 true Chr08: 2623178-2631806 Glycine max
Glyma.08G033000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2623178-2628177 Glycine max
Glyma.08G033000 5.0kb downstream 5.0kb downstream 8629 true Chr08: 2628178-2636806 Glycine max
Glyma.08G033000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2631807-2636806 Glycine max
Glyma.08G033000 10.0kb upstream 10.0kb upstream 13629 true Chr08: 2618178-2631806 Glycine max
Glyma.08G033000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2618178-2628177 Glycine max
Glyma.08G033000 10.0kb downstream 10.0kb downstream 13629 true Chr08: 2628178-2641806 Glycine max
Glyma.08G033000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2631807-2641806 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315814 5265 Fabidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.62717 0.0 8.43493    
cufflinks 2.14038 0.0 10.7904    
cufflinks 0.393946 0.0 1.9528   Low
cufflinks 2.5484 0.0 11.5038    
cufflinks 1.448 0.0 7.97166    
cufflinks 0.796309 0.0 4.97692    
cufflinks 7.92143 0.0 25.8913   High
cufflinks 2.22492 0.0 10.5316    
cufflinks 6.99745 0.0 23.6242   High
cufflinks 0.593        
cufflinks 0.01     Low Low
cufflinks 0.359        
cufflinks 0.459        
cufflinks 0.737        
cufflinks 0.083        
cufflinks 1.032        
cufflinks 0.101        
cufflinks 0.691        
cufflinks 0.695        
cufflinks 0.796        
cufflinks 0.021     Low Low
cufflinks 0.871        
cufflinks 1.746       High
cufflinks 0.018     Low Low
cufflinks 0.82        
cufflinks 0.039     Low Low

0 Strain