Gene : Glyma.07G191000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 Genomic Order:  1910
Name:  ? Glyma.07G191000 Secondary Identifier:  ? PAC:30495025
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G191000 0.5kb upstream 0.5kb upstream 2512 true Chr07: 35856065-35858576 Glycine max
Glyma.07G191000 0.5kb upstream 0.5kb upstream 500 false Chr07: 35858077-35858576 Glycine max
Glyma.07G191000 0.5kb downstream 0.5kb downstream 2512 true Chr07: 35855565-35858076 Glycine max
Glyma.07G191000 0.5kb downstream 0.5kb downstream 500 false Chr07: 35855565-35856064 Glycine max
Glyma.07G191000 1.0kb upstream 1.0kb upstream 3012 true Chr07: 35856065-35859076 Glycine max
Glyma.07G191000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35858077-35859076 Glycine max
Glyma.07G191000 1.0kb downstream 1.0kb downstream 3012 true Chr07: 35855065-35858076 Glycine max
Glyma.07G191000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35855065-35856064 Glycine max
Glyma.07G191000 2.0kb upstream 2.0kb upstream 4012 true Chr07: 35856065-35860076 Glycine max
Glyma.07G191000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35858077-35860076 Glycine max
Glyma.07G191000 2.0kb downstream 2.0kb downstream 4012 true Chr07: 35854065-35858076 Glycine max
Glyma.07G191000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35854065-35856064 Glycine max
Glyma.07G191000 5.0kb upstream 5.0kb upstream 7012 true Chr07: 35856065-35863076 Glycine max
Glyma.07G191000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35858077-35863076 Glycine max
Glyma.07G191000 5.0kb downstream 5.0kb downstream 7012 true Chr07: 35851065-35858076 Glycine max
Glyma.07G191000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35851065-35856064 Glycine max
Glyma.07G191000 10.0kb upstream 10.0kb upstream 12012 true Chr07: 35856065-35868076 Glycine max
Glyma.07G191000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35858077-35868076 Glycine max
Glyma.07G191000 10.0kb downstream 10.0kb downstream 12012 true Chr07: 35846065-35858076 Glycine max
Glyma.07G191000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35846065-35856064 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299464 5265 Fabidae View MSA
124064645 5270 Rosid View MSA
123751452 5271 Pentapetalae View MSA
122791006 5272 Eudicot View MSA
122044389 5273 Angiosperm View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.056 0.0 64.2197 High  
cufflinks 23.318 0.0 62.2706 High  
cufflinks 27.9121 0.0 74.4728 High  
cufflinks 18.9091 0.0 50.7479   Low
cufflinks 23.162 0.0 61.8535 High  
cufflinks 52.4447 0.0 143.48 High High
cufflinks 20.5261 0.0 54.9601    
cufflinks 32.8894 0.0 87.9605 High  
cufflinks 23.5973 0.0 62.993 High  
cufflinks 25.798     High High
cufflinks 14.059     High  
cufflinks 15.973     High  
cufflinks 12.068     High  
cufflinks 9.878     High Low
cufflinks 10.082     High  
cufflinks 9.184     High Low
cufflinks 19.808     High High
cufflinks 11.245     High  
cufflinks 14.282     High  
cufflinks 10.614     High  
cufflinks 13.74     High  
cufflinks 10.574     High  
cufflinks 10.355     High  
cufflinks 14.955     High  
cufflinks 11.768     High  
cufflinks 14.619     High  

0 Strain