Gene : Glyma.07G198200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15696:SF3 - PROTEIN SMG7L Genomic Order:  1982
Name:  ? Glyma.07G198200 Secondary Identifier:  ? PAC:30493955
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G198200 0.5kb upstream 0.5kb upstream 6105 true Chr07: 36682772-36688876 Glycine max
Glyma.07G198200 0.5kb upstream 0.5kb upstream 500 false Chr07: 36682772-36683271 Glycine max
Glyma.07G198200 0.5kb downstream 0.5kb downstream 6105 true Chr07: 36683272-36689376 Glycine max
Glyma.07G198200 0.5kb downstream 0.5kb downstream 500 false Chr07: 36688877-36689376 Glycine max
Glyma.07G198200 1.0kb upstream 1.0kb upstream 6605 true Chr07: 36682272-36688876 Glycine max
Glyma.07G198200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36682272-36683271 Glycine max
Glyma.07G198200 1.0kb downstream 1.0kb downstream 6605 true Chr07: 36683272-36689876 Glycine max
Glyma.07G198200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36688877-36689876 Glycine max
Glyma.07G198200 2.0kb upstream 2.0kb upstream 7605 true Chr07: 36681272-36688876 Glycine max
Glyma.07G198200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36681272-36683271 Glycine max
Glyma.07G198200 2.0kb downstream 2.0kb downstream 7605 true Chr07: 36683272-36690876 Glycine max
Glyma.07G198200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36688877-36690876 Glycine max
Glyma.07G198200 5.0kb upstream 5.0kb upstream 10605 true Chr07: 36678272-36688876 Glycine max
Glyma.07G198200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36678272-36683271 Glycine max
Glyma.07G198200 5.0kb downstream 5.0kb downstream 10605 true Chr07: 36683272-36693876 Glycine max
Glyma.07G198200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36688877-36693876 Glycine max
Glyma.07G198200 10.0kb upstream 10.0kb upstream 15605 true Chr07: 36673272-36688876 Glycine max
Glyma.07G198200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36673272-36683271 Glycine max
Glyma.07G198200 10.0kb downstream 10.0kb downstream 15605 true Chr07: 36683272-36698876 Glycine max
Glyma.07G198200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36688877-36698876 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300747 5265 Fabidae View MSA
124050275 5270 Rosid View MSA
123740560 5271 Pentapetalae View MSA
122792675 5272 Eudicot View MSA
122043425 5273 Angiosperm View MSA
121310120 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61079 0.0 8.5732   Low
cufflinks 2.70301 0.0 11.8726    
cufflinks 2.57745 0.0 12.402    
cufflinks 3.86558 0.0 15.8054    
cufflinks 2.5317 0.0 10.1989    
cufflinks 5.41242 0.0 20.1293    
cufflinks 3.44352 0.0 12.8299    
cufflinks 5.34417 0.0 18.4343    
cufflinks 6.83769 0.0 27.9035   High
cufflinks 0.329        
cufflinks 0.622        
cufflinks 0.49        
cufflinks 0.112        
cufflinks 0.058     Low Low
cufflinks 0.919       High
cufflinks 0.123        
cufflinks 0.083       Low
cufflinks 0.612        
cufflinks 0.59        
cufflinks 0.116        
cufflinks 0.59        
cufflinks 0.159        
cufflinks 0.127        
cufflinks 0.924       High
cufflinks 0.146        
cufflinks 0.182        

0 Strain