Gene : Glyma.07G116700 G. max Wm82.a2.v1
Defline:  (1 of 22) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Genomic Order:  1167
Name:  ? Glyma.07G116700 Secondary Identifier:  ? PAC:30493245
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G116700 0.5kb upstream 0.5kb upstream 6140 true Chr07: 13015243-13021382 Glycine max
Glyma.07G116700 0.5kb upstream 0.5kb upstream 500 false Chr07: 13015243-13015742 Glycine max
Glyma.07G116700 0.5kb downstream 0.5kb downstream 6140 true Chr07: 13015743-13021882 Glycine max
Glyma.07G116700 0.5kb downstream 0.5kb downstream 500 false Chr07: 13021383-13021882 Glycine max
Glyma.07G116700 1.0kb upstream 1.0kb upstream 6640 true Chr07: 13014743-13021382 Glycine max
Glyma.07G116700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13014743-13015742 Glycine max
Glyma.07G116700 1.0kb downstream 1.0kb downstream 6640 true Chr07: 13015743-13022382 Glycine max
Glyma.07G116700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13021383-13022382 Glycine max
Glyma.07G116700 2.0kb upstream 2.0kb upstream 7640 true Chr07: 13013743-13021382 Glycine max
Glyma.07G116700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13013743-13015742 Glycine max
Glyma.07G116700 2.0kb downstream 2.0kb downstream 7640 true Chr07: 13015743-13023382 Glycine max
Glyma.07G116700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13021383-13023382 Glycine max
Glyma.07G116700 5.0kb upstream 5.0kb upstream 10640 true Chr07: 13010743-13021382 Glycine max
Glyma.07G116700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13010743-13015742 Glycine max
Glyma.07G116700 5.0kb downstream 5.0kb downstream 10640 true Chr07: 13015743-13026382 Glycine max
Glyma.07G116700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13021383-13026382 Glycine max
Glyma.07G116700 10.0kb upstream 10.0kb upstream 15640 true Chr07: 13005743-13021382 Glycine max
Glyma.07G116700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13005743-13015742 Glycine max
Glyma.07G116700 10.0kb downstream 10.0kb downstream 15640 true Chr07: 13015743-13031382 Glycine max
Glyma.07G116700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13021383-13031382 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296971 5265 Fabidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88664 0.0 6.3882    
cufflinks 5.25603 0.0 17.2865   High
cufflinks 0.412861 0.0 1.89311    
cufflinks 2.28014 0.0 7.22206    
cufflinks 0.285755 0.0 1.40268    
cufflinks 0.195076 0.0 0.932656 Low Low
cufflinks 0.160947 0.0 0.800939 Low Low
cufflinks 1.26525 0.0 4.75271    
cufflinks 0.403494 0.0 1.93051    
cufflinks 1.19        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.9        
cufflinks 0.009     Low Low
cufflinks 0.015     Low Low
cufflinks 0.007     Low Low
cufflinks 0.804        
cufflinks 0.006     Low Low
cufflinks 0.66        
cufflinks 2.666       High
cufflinks 0.447        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.64        
cufflinks 0.588        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.227        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain