Gene : Glyma.07G125600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33172:SF2 - EMB Genomic Order:  1256
Name:  ? Glyma.07G125600 Secondary Identifier:  ? PAC:30494852
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G125600 0.5kb upstream 0.5kb upstream 1877 true Chr07: 15001863-15003739 Glycine max
Glyma.07G125600 0.5kb upstream 0.5kb upstream 500 false Chr07: 15003240-15003739 Glycine max
Glyma.07G125600 0.5kb downstream 0.5kb downstream 1877 true Chr07: 15001363-15003239 Glycine max
Glyma.07G125600 0.5kb downstream 0.5kb downstream 500 false Chr07: 15001363-15001862 Glycine max
Glyma.07G125600 1.0kb upstream 1.0kb upstream 2377 true Chr07: 15001863-15004239 Glycine max
Glyma.07G125600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15003240-15004239 Glycine max
Glyma.07G125600 1.0kb downstream 1.0kb downstream 2377 true Chr07: 15000863-15003239 Glycine max
Glyma.07G125600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15000863-15001862 Glycine max
Glyma.07G125600 2.0kb upstream 2.0kb upstream 3377 true Chr07: 15001863-15005239 Glycine max
Glyma.07G125600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15003240-15005239 Glycine max
Glyma.07G125600 2.0kb downstream 2.0kb downstream 3377 true Chr07: 14999863-15003239 Glycine max
Glyma.07G125600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14999863-15001862 Glycine max
Glyma.07G125600 5.0kb upstream 5.0kb upstream 6377 true Chr07: 15001863-15008239 Glycine max
Glyma.07G125600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15003240-15008239 Glycine max
Glyma.07G125600 5.0kb downstream 5.0kb downstream 6377 true Chr07: 14996863-15003239 Glycine max
Glyma.07G125600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14996863-15001862 Glycine max
Glyma.07G125600 10.0kb upstream 10.0kb upstream 11377 true Chr07: 15001863-15013239 Glycine max
Glyma.07G125600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15003240-15013239 Glycine max
Glyma.07G125600 10.0kb downstream 10.0kb downstream 11377 true Chr07: 14991863-15003239 Glycine max
Glyma.07G125600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14991863-15001862 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311637 5265 Fabidae View MSA
124074077 5270 Rosid View MSA
123750402 5271 Pentapetalae View MSA
122795824 5272 Eudicot View MSA
122046186 5273 Angiosperm View MSA
121310570 5274 Embryophyte View MSA
123348021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.81 0.0 58.8697   High
cufflinks 2.32952 0.0 8.10446    
cufflinks 19.621 0.0 53.0501   High
cufflinks 3.45101 0.0 11.5001    
cufflinks 2.12854 0.0 7.48461    
cufflinks 8.1786 0.0 24.2065    
cufflinks 0.0853831 0.0 0.350247 Low Low
cufflinks 0.848221 0.0 3.15114    
cufflinks 2.79378 0.0 9.54644    
cufflinks 9.643     High Low
cufflinks 280.732     High High
cufflinks 20.898     High  
cufflinks 4.099       Low
cufflinks 5.211       Low
cufflinks 172.233     High  
cufflinks 77.051     High  
cufflinks 40.804     High  
cufflinks 15.926     High  
cufflinks 9.083     High Low
cufflinks 100.14     High  
cufflinks 335.589     High High
cufflinks 41.51     High  
cufflinks 14.875     High  
cufflinks 161.035     High  
cufflinks 95.063     High  
cufflinks 289.347     High High

0 Strain