Gene : Glyma.07G144100 G. max Wm82.a2.v1
Defline:  (1 of 117) PF00560//PF08263//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  1441
Name:  ? Glyma.07G144100 Secondary Identifier:  ? PAC:30493672
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G144100 0.5kb upstream 0.5kb upstream 6865 true Chr07: 17162573-17169437 Glycine max
Glyma.07G144100 0.5kb upstream 0.5kb upstream 500 false Chr07: 17168938-17169437 Glycine max
Glyma.07G144100 0.5kb downstream 0.5kb downstream 6865 true Chr07: 17162073-17168937 Glycine max
Glyma.07G144100 0.5kb downstream 0.5kb downstream 500 false Chr07: 17162073-17162572 Glycine max
Glyma.07G144100 1.0kb upstream 1.0kb upstream 7365 true Chr07: 17162573-17169937 Glycine max
Glyma.07G144100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17168938-17169937 Glycine max
Glyma.07G144100 1.0kb downstream 1.0kb downstream 7365 true Chr07: 17161573-17168937 Glycine max
Glyma.07G144100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17161573-17162572 Glycine max
Glyma.07G144100 2.0kb upstream 2.0kb upstream 8365 true Chr07: 17162573-17170937 Glycine max
Glyma.07G144100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17168938-17170937 Glycine max
Glyma.07G144100 2.0kb downstream 2.0kb downstream 8365 true Chr07: 17160573-17168937 Glycine max
Glyma.07G144100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17160573-17162572 Glycine max
Glyma.07G144100 5.0kb upstream 5.0kb upstream 11365 true Chr07: 17162573-17173937 Glycine max
Glyma.07G144100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17168938-17173937 Glycine max
Glyma.07G144100 5.0kb downstream 5.0kb downstream 11365 true Chr07: 17157573-17168937 Glycine max
Glyma.07G144100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17157573-17162572 Glycine max
Glyma.07G144100 10.0kb upstream 10.0kb upstream 16365 true Chr07: 17162573-17178937 Glycine max
Glyma.07G144100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17168938-17178937 Glycine max
Glyma.07G144100 10.0kb downstream 10.0kb downstream 16365 true Chr07: 17152573-17168937 Glycine max
Glyma.07G144100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17152573-17162572 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297610 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1212 0.0 103.736 High High
cufflinks 0.707616 0.0 2.86301    
cufflinks 3.55608 0.0 15.441    
cufflinks 2.19963 0.0 10.6441    
cufflinks 0.178556 0.0 0.880054 Low  
cufflinks 0.0399063 0.0 0.16115 Low Low
cufflinks 1.65493 0.0 7.38333    
cufflinks 2.44365 0.0 12.0149    
cufflinks 0.127922 0.0 0.897899 Low Low
cufflinks 1.337       High
cufflinks 0.011     Low  
cufflinks 0.842       High
cufflinks 0.01     Low  
cufflinks 0.014     Low  
cufflinks 0.006     Low Low
cufflinks 0.159        
cufflinks 0.005     Low Low
cufflinks 0.412        
cufflinks 0.584       High
cufflinks 0.169        
cufflinks 0.003     Low Low
cufflinks 0.227        
cufflinks 1.437       High
cufflinks 0.029     Low  
cufflinks 0.187        
cufflinks 0.014     Low  

0 Strain