Gene : Glyma.07G046400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 Genomic Order:  464
Name:  ? Glyma.07G046400 Secondary Identifier:  ? PAC:30494254
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G046400 0.5kb upstream 0.5kb upstream 2232 true Chr07: 3888795-3891026 Glycine max
Glyma.07G046400 0.5kb upstream 0.5kb upstream 500 false Chr07: 3890527-3891026 Glycine max
Glyma.07G046400 0.5kb downstream 0.5kb downstream 2232 true Chr07: 3888295-3890526 Glycine max
Glyma.07G046400 0.5kb downstream 0.5kb downstream 500 false Chr07: 3888295-3888794 Glycine max
Glyma.07G046400 1.0kb upstream 1.0kb upstream 2732 true Chr07: 3888795-3891526 Glycine max
Glyma.07G046400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 3890527-3891526 Glycine max
Glyma.07G046400 1.0kb downstream 1.0kb downstream 2732 true Chr07: 3887795-3890526 Glycine max
Glyma.07G046400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 3887795-3888794 Glycine max
Glyma.07G046400 2.0kb upstream 2.0kb upstream 3732 true Chr07: 3888795-3892526 Glycine max
Glyma.07G046400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 3890527-3892526 Glycine max
Glyma.07G046400 2.0kb downstream 2.0kb downstream 3732 true Chr07: 3886795-3890526 Glycine max
Glyma.07G046400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 3886795-3888794 Glycine max
Glyma.07G046400 5.0kb upstream 5.0kb upstream 6732 true Chr07: 3888795-3895526 Glycine max
Glyma.07G046400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 3890527-3895526 Glycine max
Glyma.07G046400 5.0kb downstream 5.0kb downstream 6732 true Chr07: 3883795-3890526 Glycine max
Glyma.07G046400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 3883795-3888794 Glycine max
Glyma.07G046400 10.0kb upstream 10.0kb upstream 11732 true Chr07: 3888795-3900526 Glycine max
Glyma.07G046400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 3890527-3900526 Glycine max
Glyma.07G046400 10.0kb downstream 10.0kb downstream 11732 true Chr07: 3878795-3890526 Glycine max
Glyma.07G046400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 3878795-3888794 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301564 5265 Fabidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.41053 0.0 18.2548   High
cufflinks 0.558314 0.0 2.06306    
cufflinks 0.579646 0.0 2.1374    
cufflinks 0.117713 0.0 0.464913 Low Low
cufflinks 0.603004 0.0 2.21895    
cufflinks 3.76872 0.0 11.4944   High
cufflinks 0.330747 0.0 1.25192    
cufflinks 0.857 0.0 3.08219    
cufflinks 0.497878 0.0 1.84898    
cufflinks 0.711        
cufflinks 3.155       High
cufflinks 0.869        
cufflinks 1.414        
cufflinks 0.369       Low
cufflinks 0.416       Low
cufflinks 1.172        
cufflinks 1.067        
cufflinks 0.377       Low
cufflinks 0.86        
cufflinks 0.624        
cufflinks 4.637       High
cufflinks 1.083        
cufflinks 1.163        
cufflinks 4.646       High
cufflinks 0.711        
cufflinks 1.806        

0 Strain