Gene : Glyma.06G308900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31675:SF2 - AXIAL REGULATOR YABBY 2-RELATED Genomic Order:  3089
Name:  ? Glyma.06G308900 Secondary Identifier:  ? PAC:30551557
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G308900 0.5kb upstream 0.5kb upstream 9277 true Chr06: 49750609-49759885 Glycine max
Glyma.06G308900 0.5kb upstream 0.5kb upstream 500 false Chr06: 49750609-49751108 Glycine max
Glyma.06G308900 0.5kb downstream 0.5kb downstream 9277 true Chr06: 49751109-49760385 Glycine max
Glyma.06G308900 0.5kb downstream 0.5kb downstream 500 false Chr06: 49759886-49760385 Glycine max
Glyma.06G308900 1.0kb upstream 1.0kb upstream 9777 true Chr06: 49750109-49759885 Glycine max
Glyma.06G308900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49750109-49751108 Glycine max
Glyma.06G308900 1.0kb downstream 1.0kb downstream 9777 true Chr06: 49751109-49760885 Glycine max
Glyma.06G308900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49759886-49760885 Glycine max
Glyma.06G308900 2.0kb upstream 2.0kb upstream 10777 true Chr06: 49749109-49759885 Glycine max
Glyma.06G308900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49749109-49751108 Glycine max
Glyma.06G308900 2.0kb downstream 2.0kb downstream 10777 true Chr06: 49751109-49761885 Glycine max
Glyma.06G308900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49759886-49761885 Glycine max
Glyma.06G308900 5.0kb upstream 5.0kb upstream 13777 true Chr06: 49746109-49759885 Glycine max
Glyma.06G308900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49746109-49751108 Glycine max
Glyma.06G308900 5.0kb downstream 5.0kb downstream 13777 true Chr06: 49751109-49764885 Glycine max
Glyma.06G308900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49759886-49764885 Glycine max
Glyma.06G308900 10.0kb upstream 10.0kb upstream 18777 true Chr06: 49741109-49759885 Glycine max
Glyma.06G308900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49741109-49751108 Glycine max
Glyma.06G308900 10.0kb downstream 10.0kb downstream 18777 true Chr06: 49751109-49769885 Glycine max
Glyma.06G308900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49759886-49769885 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121610909 5273 Angiosperm Singleton cluster - no MSA
122243796 5265 Fabidae Singleton cluster - no MSA
123988239 5270 Rosid Singleton cluster - no MSA
123563437 5271 Pentapetalae Singleton cluster - no MSA
122598216 5272 Eudicot Singleton cluster - no MSA
120883147 5274 Embryophyte Singleton cluster - no MSA
122923973 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.85308 0.0 45.9402    
cufflinks 29.9302 0.0 125.93 High  
cufflinks 28.1441 0.0 119.05 High  
cufflinks 93.8768 0.0 472.462 High High
cufflinks 0.0316982 0.0 0.150644 Low Low
cufflinks 1.84784 0.0 12.5422    
cufflinks 17.6331 0.0 70.9741    
cufflinks 3.0414 0.0 18.4514    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.001     Low Low
cufflinks 0.586        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.755        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.673        
cufflinks 0.95        
cufflinks 0.734        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.799        
cufflinks 0.657        
cufflinks 0.001     Low Low
cufflinks 0.817        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain