Gene : Glyma.06G313800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33512:SF2 - F16P17.15 Genomic Order:  3138
Name:  ? Glyma.06G313800 Secondary Identifier:  ? PAC:30553190
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G313800 0.5kb upstream 0.5kb upstream 2524 true Chr06: 50252124-50254647 Glycine max
Glyma.06G313800 0.5kb upstream 0.5kb upstream 500 false Chr06: 50252124-50252623 Glycine max
Glyma.06G313800 0.5kb downstream 0.5kb downstream 2524 true Chr06: 50252624-50255147 Glycine max
Glyma.06G313800 0.5kb downstream 0.5kb downstream 500 false Chr06: 50254648-50255147 Glycine max
Glyma.06G313800 1.0kb upstream 1.0kb upstream 3024 true Chr06: 50251624-50254647 Glycine max
Glyma.06G313800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50251624-50252623 Glycine max
Glyma.06G313800 1.0kb downstream 1.0kb downstream 3024 true Chr06: 50252624-50255647 Glycine max
Glyma.06G313800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50254648-50255647 Glycine max
Glyma.06G313800 2.0kb upstream 2.0kb upstream 4024 true Chr06: 50250624-50254647 Glycine max
Glyma.06G313800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50250624-50252623 Glycine max
Glyma.06G313800 2.0kb downstream 2.0kb downstream 4024 true Chr06: 50252624-50256647 Glycine max
Glyma.06G313800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50254648-50256647 Glycine max
Glyma.06G313800 5.0kb upstream 5.0kb upstream 7024 true Chr06: 50247624-50254647 Glycine max
Glyma.06G313800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50247624-50252623 Glycine max
Glyma.06G313800 5.0kb downstream 5.0kb downstream 7024 true Chr06: 50252624-50259647 Glycine max
Glyma.06G313800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50254648-50259647 Glycine max
Glyma.06G313800 10.0kb upstream 10.0kb upstream 12024 true Chr06: 50242624-50254647 Glycine max
Glyma.06G313800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50242624-50252623 Glycine max
Glyma.06G313800 10.0kb downstream 10.0kb downstream 12024 true Chr06: 50252624-50264647 Glycine max
Glyma.06G313800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50254648-50264647 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302736 5265 Fabidae View MSA
124063099 5270 Rosid View MSA
123739711 5271 Pentapetalae View MSA
122787000 5272 Eudicot View MSA
122049510 5273 Angiosperm View MSA
121311447 5274 Embryophyte View MSA
123348742 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.172154 0.0 0.667824 Low  
cufflinks 1.21423 0.0 4.22548   High
cufflinks 0.114703 0.0 0.451612 Low Low
cufflinks 0.13788 0.0 0.539409 Low  
cufflinks 0.752814 0.0 2.7174    
cufflinks 0.42903 0.0 1.59696    
cufflinks 0.117344 0.0 0.461948 Low Low
cufflinks 2.78674 0.0 8.72071   High
cufflinks 0.497412 0.0 1.83768    
cufflinks 3.333       High
cufflinks 0.072       Low
cufflinks 0.337        
cufflinks 1.215        
cufflinks 0.779        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.65        
cufflinks 0.363        
cufflinks 0.671        
cufflinks 1.477        
cufflinks 0.549        
cufflinks 0.031     Low Low
cufflinks 0.769        
cufflinks 1.45        
cufflinks 0.065       Low
cufflinks 0.562        
cufflinks 0.119       Low

0 Strain