Gene : Glyma.06G318600 G. max Wm82.a2.v1
Defline:  (1 of 38) PTHR23155//PTHR23155:SF414 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  3186
Name:  ? Glyma.06G318600 Secondary Identifier:  ? PAC:30551242
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G318600 0.5kb upstream 0.5kb upstream 3971 true Chr06: 50717578-50721548 Glycine max
Glyma.06G318600 0.5kb upstream 0.5kb upstream 500 false Chr06: 50717578-50718077 Glycine max
Glyma.06G318600 0.5kb downstream 0.5kb downstream 3971 true Chr06: 50718078-50722048 Glycine max
Glyma.06G318600 0.5kb downstream 0.5kb downstream 500 false Chr06: 50721549-50722048 Glycine max
Glyma.06G318600 1.0kb upstream 1.0kb upstream 4471 true Chr06: 50717078-50721548 Glycine max
Glyma.06G318600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50717078-50718077 Glycine max
Glyma.06G318600 1.0kb downstream 1.0kb downstream 4471 true Chr06: 50718078-50722548 Glycine max
Glyma.06G318600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50721549-50722548 Glycine max
Glyma.06G318600 2.0kb upstream 2.0kb upstream 5471 true Chr06: 50716078-50721548 Glycine max
Glyma.06G318600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50716078-50718077 Glycine max
Glyma.06G318600 2.0kb downstream 2.0kb downstream 5471 true Chr06: 50718078-50723548 Glycine max
Glyma.06G318600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50721549-50723548 Glycine max
Glyma.06G318600 5.0kb upstream 5.0kb upstream 8471 true Chr06: 50713078-50721548 Glycine max
Glyma.06G318600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50713078-50718077 Glycine max
Glyma.06G318600 5.0kb downstream 5.0kb downstream 8471 true Chr06: 50718078-50726548 Glycine max
Glyma.06G318600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50721549-50726548 Glycine max
Glyma.06G318600 10.0kb upstream 10.0kb upstream 13471 true Chr06: 50708078-50721548 Glycine max
Glyma.06G318600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50708078-50718077 Glycine max
Glyma.06G318600 10.0kb downstream 10.0kb downstream 13471 true Chr06: 50718078-50731548 Glycine max
Glyma.06G318600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50721549-50731548 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782904 5273 Angiosperm View MSA
122243839 5265 Fabidae Singleton cluster - no MSA
124051611 5270 Rosid View MSA
123754067 5271 Pentapetalae View MSA
122775480 5272 Eudicot View MSA
121054404 5274 Embryophyte View MSA
123094390 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.153928 0.0 0.585396 Low  
cufflinks 0.159709 0.0 0.605854 Low  
cufflinks 0.0465556 0.0 0.185342 Low Low
cufflinks 0.433345 0.0 1.55985    
cufflinks 0.125939 0.0 0.483392 Low  
cufflinks 0.0515725 0.0 0.204821 Low Low
cufflinks 0.318001 0.0 1.16943    
cufflinks 0.84732 0.0 2.87921   High
cufflinks 0.241067 0.0 0.897703 Low  
cufflinks 0.401       High
cufflinks 0.037     Low Low
cufflinks 0.133        
cufflinks 0.354       High
cufflinks 0.201        
cufflinks 0.016     Low Low
cufflinks 0.114        
cufflinks 0.112        
cufflinks 0.225        
cufflinks 0.276       High
cufflinks 0.135        
cufflinks 0.017     Low Low
cufflinks 0.122        
cufflinks 0.098     Low  
cufflinks 0.037     Low Low
cufflinks 0.111        
cufflinks 0.069        

0 Strain