Gene : Glyma.06G279700 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2797
Name:  ? Glyma.06G279700 Secondary Identifier:  ? PAC:30550713
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G279700 0.5kb upstream 0.5kb upstream 779 true Chr06: 47032394-47033172 Glycine max
Glyma.06G279700 0.5kb upstream 0.5kb upstream 500 false Chr06: 47032673-47033172 Glycine max
Glyma.06G279700 0.5kb downstream 0.5kb downstream 779 true Chr06: 47031894-47032672 Glycine max
Glyma.06G279700 0.5kb downstream 0.5kb downstream 500 false Chr06: 47031894-47032393 Glycine max
Glyma.06G279700 1.0kb upstream 1.0kb upstream 1279 true Chr06: 47032394-47033672 Glycine max
Glyma.06G279700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47032673-47033672 Glycine max
Glyma.06G279700 1.0kb downstream 1.0kb downstream 1279 true Chr06: 47031394-47032672 Glycine max
Glyma.06G279700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47031394-47032393 Glycine max
Glyma.06G279700 2.0kb upstream 2.0kb upstream 2279 true Chr06: 47032394-47034672 Glycine max
Glyma.06G279700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47032673-47034672 Glycine max
Glyma.06G279700 2.0kb downstream 2.0kb downstream 2279 true Chr06: 47030394-47032672 Glycine max
Glyma.06G279700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47030394-47032393 Glycine max
Glyma.06G279700 5.0kb upstream 5.0kb upstream 5279 true Chr06: 47032394-47037672 Glycine max
Glyma.06G279700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47032673-47037672 Glycine max
Glyma.06G279700 5.0kb downstream 5.0kb downstream 5279 true Chr06: 47027394-47032672 Glycine max
Glyma.06G279700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47027394-47032393 Glycine max
Glyma.06G279700 10.0kb upstream 10.0kb upstream 10279 true Chr06: 47032394-47042672 Glycine max
Glyma.06G279700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47032673-47042672 Glycine max
Glyma.06G279700 10.0kb downstream 10.0kb downstream 10279 true Chr06: 47022394-47032672 Glycine max
Glyma.06G279700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47022394-47032393 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0063681 0.0 0.0816848 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0876842 0.0 0.436014 Low  
cufflinks 0.00359795 0.0 0.0578744 Low Low
cufflinks 0.0544884 0.0 0.28497 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.285611 0.0 1.2547   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.347        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.223        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.938       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain