Gene : Glyma.06G279600 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2796
Name:  ? Glyma.06G279600 Secondary Identifier:  ? PAC:30551965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G279600 0.5kb upstream 0.5kb upstream 942 true Chr06: 47030210-47031151 Glycine max
Glyma.06G279600 0.5kb upstream 0.5kb upstream 500 false Chr06: 47030210-47030709 Glycine max
Glyma.06G279600 0.5kb downstream 0.5kb downstream 942 true Chr06: 47030710-47031651 Glycine max
Glyma.06G279600 0.5kb downstream 0.5kb downstream 500 false Chr06: 47031152-47031651 Glycine max
Glyma.06G279600 1.0kb upstream 1.0kb upstream 1442 true Chr06: 47029710-47031151 Glycine max
Glyma.06G279600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47029710-47030709 Glycine max
Glyma.06G279600 1.0kb downstream 1.0kb downstream 1442 true Chr06: 47030710-47032151 Glycine max
Glyma.06G279600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47031152-47032151 Glycine max
Glyma.06G279600 2.0kb upstream 2.0kb upstream 2442 true Chr06: 47028710-47031151 Glycine max
Glyma.06G279600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47028710-47030709 Glycine max
Glyma.06G279600 2.0kb downstream 2.0kb downstream 2442 true Chr06: 47030710-47033151 Glycine max
Glyma.06G279600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47031152-47033151 Glycine max
Glyma.06G279600 5.0kb upstream 5.0kb upstream 5442 true Chr06: 47025710-47031151 Glycine max
Glyma.06G279600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47025710-47030709 Glycine max
Glyma.06G279600 5.0kb downstream 5.0kb downstream 5442 true Chr06: 47030710-47036151 Glycine max
Glyma.06G279600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47031152-47036151 Glycine max
Glyma.06G279600 10.0kb upstream 10.0kb upstream 10442 true Chr06: 47020710-47031151 Glycine max
Glyma.06G279600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47020710-47030709 Glycine max
Glyma.06G279600 10.0kb downstream 10.0kb downstream 10442 true Chr06: 47030710-47041151 Glycine max
Glyma.06G279600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47031152-47041151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.273149 0.0 1.10773    
cufflinks 0.100081 0.0 0.432944 Low  
cufflinks 0.126573 0.0 0.537472 Low  
cufflinks 0.401143 0.0 1.60043    
cufflinks 0.035669 0.0 0.169995 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.20517 0.0 4.59531   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.966        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.108     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.348       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.107     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.333        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.502        
cufflinks 0.042     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.486       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain