Gene : Glyma.06G279500 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2795
Name:  ? Glyma.06G279500 Secondary Identifier:  ? PAC:30554059
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G279500 0.5kb upstream 0.5kb upstream 1000 true Chr06: 47029313-47030312 Glycine max
Glyma.06G279500 0.5kb upstream 0.5kb upstream 500 false Chr06: 47029813-47030312 Glycine max
Glyma.06G279500 0.5kb downstream 0.5kb downstream 1000 true Chr06: 47028813-47029812 Glycine max
Glyma.06G279500 0.5kb downstream 0.5kb downstream 500 false Chr06: 47028813-47029312 Glycine max
Glyma.06G279500 1.0kb upstream 1.0kb upstream 1500 true Chr06: 47029313-47030812 Glycine max
Glyma.06G279500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47029813-47030812 Glycine max
Glyma.06G279500 1.0kb downstream 1.0kb downstream 1500 true Chr06: 47028313-47029812 Glycine max
Glyma.06G279500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47028313-47029312 Glycine max
Glyma.06G279500 2.0kb upstream 2.0kb upstream 2500 true Chr06: 47029313-47031812 Glycine max
Glyma.06G279500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47029813-47031812 Glycine max
Glyma.06G279500 2.0kb downstream 2.0kb downstream 2500 true Chr06: 47027313-47029812 Glycine max
Glyma.06G279500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47027313-47029312 Glycine max
Glyma.06G279500 5.0kb upstream 5.0kb upstream 5500 true Chr06: 47029313-47034812 Glycine max
Glyma.06G279500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47029813-47034812 Glycine max
Glyma.06G279500 5.0kb downstream 5.0kb downstream 5500 true Chr06: 47024313-47029812 Glycine max
Glyma.06G279500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47024313-47029312 Glycine max
Glyma.06G279500 10.0kb upstream 10.0kb upstream 10500 true Chr06: 47029313-47039812 Glycine max
Glyma.06G279500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47029813-47039812 Glycine max
Glyma.06G279500 10.0kb downstream 10.0kb downstream 10500 true Chr06: 47019313-47029812 Glycine max
Glyma.06G279500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47019313-47029312 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.504785 0.0 1.99359    
cufflinks 0.577414 0.0 2.26827    
cufflinks 0.685613 0.0 2.67185    
cufflinks 1.15089 0.0 4.38574   High
cufflinks 0.402046 0.0 1.59801   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.10565 0.0 4.21667   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.603       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.572       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.118       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.655        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.571        
cufflinks 0.105       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.344        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain