Gene : Glyma.06G278500 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2785
Name:  ? Glyma.06G278500 Secondary Identifier:  ? PAC:30549234
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G278500 0.5kb upstream 0.5kb upstream 773 true Chr06: 46992834-46993606 Glycine max
Glyma.06G278500 0.5kb upstream 0.5kb upstream 500 false Chr06: 46993107-46993606 Glycine max
Glyma.06G278500 0.5kb downstream 0.5kb downstream 773 true Chr06: 46992334-46993106 Glycine max
Glyma.06G278500 0.5kb downstream 0.5kb downstream 500 false Chr06: 46992334-46992833 Glycine max
Glyma.06G278500 1.0kb upstream 1.0kb upstream 1273 true Chr06: 46992834-46994106 Glycine max
Glyma.06G278500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46993107-46994106 Glycine max
Glyma.06G278500 1.0kb downstream 1.0kb downstream 1273 true Chr06: 46991834-46993106 Glycine max
Glyma.06G278500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46991834-46992833 Glycine max
Glyma.06G278500 2.0kb upstream 2.0kb upstream 2273 true Chr06: 46992834-46995106 Glycine max
Glyma.06G278500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46993107-46995106 Glycine max
Glyma.06G278500 2.0kb downstream 2.0kb downstream 2273 true Chr06: 46990834-46993106 Glycine max
Glyma.06G278500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46990834-46992833 Glycine max
Glyma.06G278500 5.0kb upstream 5.0kb upstream 5273 true Chr06: 46992834-46998106 Glycine max
Glyma.06G278500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46993107-46998106 Glycine max
Glyma.06G278500 5.0kb downstream 5.0kb downstream 5273 true Chr06: 46987834-46993106 Glycine max
Glyma.06G278500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46987834-46992833 Glycine max
Glyma.06G278500 10.0kb upstream 10.0kb upstream 10273 true Chr06: 46992834-47003106 Glycine max
Glyma.06G278500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46993107-47003106 Glycine max
Glyma.06G278500 10.0kb downstream 10.0kb downstream 10273 true Chr06: 46982834-46993106 Glycine max
Glyma.06G278500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46982834-46992833 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.426777 0.0 1.80032    
cufflinks 0.999402 0.0 4.01693    
cufflinks 0.691563 0.0 2.81861    
cufflinks 1.57857 0.0 6.22724   High
cufflinks 0.339077 0.0 1.44246    
cufflinks 0.339396 0.0 1.45449    
cufflinks 0.150574 0.0 0.689658 Low Low
cufflinks 1.44247 0.0 5.70329   High
cufflinks 0.173416 0.0 0.784357 Low Low
cufflinks 11.029     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.765        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.783        
cufflinks 0.103       Low
cufflinks 4.551        
cufflinks 0.058     Low Low
cufflinks 4.806        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.198        
cufflinks 1.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.744     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain