Gene : Glyma.06G282900 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2829
Name:  ? Glyma.06G282900 Secondary Identifier:  ? PAC:30552737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G282900 0.5kb upstream 0.5kb upstream 1780 true Chr06: 47108040-47109819 Glycine max
Glyma.06G282900 0.5kb upstream 0.5kb upstream 500 false Chr06: 47108040-47108539 Glycine max
Glyma.06G282900 0.5kb downstream 0.5kb downstream 1780 true Chr06: 47108540-47110319 Glycine max
Glyma.06G282900 0.5kb downstream 0.5kb downstream 500 false Chr06: 47109820-47110319 Glycine max
Glyma.06G282900 1.0kb upstream 1.0kb upstream 2280 true Chr06: 47107540-47109819 Glycine max
Glyma.06G282900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47107540-47108539 Glycine max
Glyma.06G282900 1.0kb downstream 1.0kb downstream 2280 true Chr06: 47108540-47110819 Glycine max
Glyma.06G282900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47109820-47110819 Glycine max
Glyma.06G282900 2.0kb upstream 2.0kb upstream 3280 true Chr06: 47106540-47109819 Glycine max
Glyma.06G282900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47106540-47108539 Glycine max
Glyma.06G282900 2.0kb downstream 2.0kb downstream 3280 true Chr06: 47108540-47111819 Glycine max
Glyma.06G282900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47109820-47111819 Glycine max
Glyma.06G282900 5.0kb upstream 5.0kb upstream 6280 true Chr06: 47103540-47109819 Glycine max
Glyma.06G282900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47103540-47108539 Glycine max
Glyma.06G282900 5.0kb downstream 5.0kb downstream 6280 true Chr06: 47108540-47114819 Glycine max
Glyma.06G282900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47109820-47114819 Glycine max
Glyma.06G282900 10.0kb upstream 10.0kb upstream 11280 true Chr06: 47098540-47109819 Glycine max
Glyma.06G282900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47098540-47108539 Glycine max
Glyma.06G282900 10.0kb downstream 10.0kb downstream 11280 true Chr06: 47108540-47119819 Glycine max
Glyma.06G282900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47109820-47119819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.124237 0.0 0.498972 Low Low
cufflinks 0.482384 0.0 1.83358    
cufflinks 0.601886 0.0 2.2628    
cufflinks 1.94124 0.0 6.82117   High
cufflinks 0.395111 0.0 1.51816    
cufflinks 0.434405 0.0 1.66059    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.520078 0.0 1.97034    
cufflinks 0.111591 0.0 0.449415 Low Low
cufflinks 1.629       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.282        
cufflinks 0.09     Low Low
cufflinks 0.432        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.714        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.966        
cufflinks 0.046     Low Low
cufflinks 0.811        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.652        
cufflinks 0.386        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.004        
cufflinks 0.036     Low Low

0 Strain