Gene : Glyma.06G282700 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2827
Name:  ? Glyma.06G282700 Secondary Identifier:  ? PAC:30549914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G282700 0.5kb upstream 0.5kb upstream 1565 true Chr06: 47105479-47107043 Glycine max
Glyma.06G282700 0.5kb upstream 0.5kb upstream 500 false Chr06: 47105479-47105978 Glycine max
Glyma.06G282700 0.5kb downstream 0.5kb downstream 1565 true Chr06: 47105979-47107543 Glycine max
Glyma.06G282700 0.5kb downstream 0.5kb downstream 500 false Chr06: 47107044-47107543 Glycine max
Glyma.06G282700 1.0kb upstream 1.0kb upstream 2065 true Chr06: 47104979-47107043 Glycine max
Glyma.06G282700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47104979-47105978 Glycine max
Glyma.06G282700 1.0kb downstream 1.0kb downstream 2065 true Chr06: 47105979-47108043 Glycine max
Glyma.06G282700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47107044-47108043 Glycine max
Glyma.06G282700 2.0kb upstream 2.0kb upstream 3065 true Chr06: 47103979-47107043 Glycine max
Glyma.06G282700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47103979-47105978 Glycine max
Glyma.06G282700 2.0kb downstream 2.0kb downstream 3065 true Chr06: 47105979-47109043 Glycine max
Glyma.06G282700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47107044-47109043 Glycine max
Glyma.06G282700 5.0kb upstream 5.0kb upstream 6065 true Chr06: 47100979-47107043 Glycine max
Glyma.06G282700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47100979-47105978 Glycine max
Glyma.06G282700 5.0kb downstream 5.0kb downstream 6065 true Chr06: 47105979-47112043 Glycine max
Glyma.06G282700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47107044-47112043 Glycine max
Glyma.06G282700 10.0kb upstream 10.0kb upstream 11065 true Chr06: 47095979-47107043 Glycine max
Glyma.06G282700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47095979-47105978 Glycine max
Glyma.06G282700 10.0kb downstream 10.0kb downstream 11065 true Chr06: 47105979-47117043 Glycine max
Glyma.06G282700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47107044-47117043 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.480089 0.0 1.84418    
cufflinks 0.225544 0.0 0.892035 Low  
cufflinks 1.39828 0.0 5.08962    
cufflinks 3.75037 0.0 12.5763   High
cufflinks 0.551816 0.0 2.10774    
cufflinks 0.92753 0.0 3.45763    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.56767 0.0 5.67685    
cufflinks 0.108054 0.0 0.440186 Low Low
cufflinks 0.058     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain