Gene : Glyma.06G201600 G. max Wm82.a2.v1
Defline:  (1 of 347) PTHR23155 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  2016
Name:  ? Glyma.06G201600 Secondary Identifier:  ? PAC:30552820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G201600 0.5kb upstream 0.5kb upstream 8110 true Chr06: 18552948-18561057 Glycine max
Glyma.06G201600 0.5kb upstream 0.5kb upstream 500 false Chr06: 18560558-18561057 Glycine max
Glyma.06G201600 0.5kb downstream 0.5kb downstream 8110 true Chr06: 18552448-18560557 Glycine max
Glyma.06G201600 0.5kb downstream 0.5kb downstream 500 false Chr06: 18552448-18552947 Glycine max
Glyma.06G201600 1.0kb upstream 1.0kb upstream 8610 true Chr06: 18552948-18561557 Glycine max
Glyma.06G201600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18560558-18561557 Glycine max
Glyma.06G201600 1.0kb downstream 1.0kb downstream 8610 true Chr06: 18551948-18560557 Glycine max
Glyma.06G201600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18551948-18552947 Glycine max
Glyma.06G201600 2.0kb upstream 2.0kb upstream 9610 true Chr06: 18552948-18562557 Glycine max
Glyma.06G201600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18560558-18562557 Glycine max
Glyma.06G201600 2.0kb downstream 2.0kb downstream 9610 true Chr06: 18550948-18560557 Glycine max
Glyma.06G201600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18550948-18552947 Glycine max
Glyma.06G201600 5.0kb upstream 5.0kb upstream 12610 true Chr06: 18552948-18565557 Glycine max
Glyma.06G201600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18560558-18565557 Glycine max
Glyma.06G201600 5.0kb downstream 5.0kb downstream 12610 true Chr06: 18547948-18560557 Glycine max
Glyma.06G201600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18547948-18552947 Glycine max
Glyma.06G201600 10.0kb upstream 10.0kb upstream 17610 true Chr06: 18552948-18570557 Glycine max
Glyma.06G201600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18560558-18570557 Glycine max
Glyma.06G201600 10.0kb downstream 10.0kb downstream 17610 true Chr06: 18542948-18560557 Glycine max
Glyma.06G201600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18542948-18552947 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310348 5265 Fabidae View MSA
124062687 5270 Rosid View MSA
123737198 5271 Pentapetalae View MSA
122786469 5272 Eudicot View MSA
122047522 5273 Angiosperm View MSA
121348904 5274 Embryophyte View MSA
123427577 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.51593 0.0 24.1532    
cufflinks 7.20055 0.0 20.7918    
cufflinks 13.5985 0.0 36.9578    
cufflinks 9.54771 0.0 26.6981    
cufflinks 10.1436 0.0 28.2512    
cufflinks 46.3621 0.0 126.154 High High
cufflinks 10.439 0.0 29.0226    
cufflinks 15.3922 0.0 41.5777    
cufflinks 11.4068 0.0 31.4118    
cufflinks 2.925        
cufflinks 4.0       High
cufflinks 1.574        
cufflinks 2.306        
cufflinks 1.402        
cufflinks 2.058        
cufflinks 1.954        
cufflinks 4.568       High
cufflinks 1.327        
cufflinks 1.167       Low
cufflinks 1.175       Low
cufflinks 3.125        
cufflinks 1.088       Low
cufflinks 1.369        
cufflinks 3.527       High
cufflinks 1.337        
cufflinks 4.389       High

0 Strain