Gene : Glyma.06G172900 G. max Wm82.a2.v1
Defline:  (1 of 3) PF10193 - Telomere length regulation protein (Telomere_reg-2) Genomic Order:  1729
Name:  ? Glyma.06G172900 Secondary Identifier:  ? PAC:30551568
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G172900 0.5kb upstream 0.5kb upstream 9524 true Chr06: 14514031-14523554 Glycine max
Glyma.06G172900 0.5kb upstream 0.5kb upstream 500 false Chr06: 14523055-14523554 Glycine max
Glyma.06G172900 0.5kb downstream 0.5kb downstream 9524 true Chr06: 14513531-14523054 Glycine max
Glyma.06G172900 0.5kb downstream 0.5kb downstream 500 false Chr06: 14513531-14514030 Glycine max
Glyma.06G172900 1.0kb upstream 1.0kb upstream 10024 true Chr06: 14514031-14524054 Glycine max
Glyma.06G172900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14523055-14524054 Glycine max
Glyma.06G172900 1.0kb downstream 1.0kb downstream 10024 true Chr06: 14513031-14523054 Glycine max
Glyma.06G172900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14513031-14514030 Glycine max
Glyma.06G172900 2.0kb upstream 2.0kb upstream 11024 true Chr06: 14514031-14525054 Glycine max
Glyma.06G172900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14523055-14525054 Glycine max
Glyma.06G172900 2.0kb downstream 2.0kb downstream 11024 true Chr06: 14512031-14523054 Glycine max
Glyma.06G172900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14512031-14514030 Glycine max
Glyma.06G172900 5.0kb upstream 5.0kb upstream 14024 true Chr06: 14514031-14528054 Glycine max
Glyma.06G172900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14523055-14528054 Glycine max
Glyma.06G172900 5.0kb downstream 5.0kb downstream 14024 true Chr06: 14509031-14523054 Glycine max
Glyma.06G172900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14509031-14514030 Glycine max
Glyma.06G172900 10.0kb upstream 10.0kb upstream 19024 true Chr06: 14514031-14533054 Glycine max
Glyma.06G172900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14523055-14533054 Glycine max
Glyma.06G172900 10.0kb downstream 10.0kb downstream 19024 true Chr06: 14504031-14523054 Glycine max
Glyma.06G172900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14504031-14514030 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243795 5265 Fabidae Singleton cluster - no MSA
124070341 5270 Rosid View MSA
123736800 5271 Pentapetalae View MSA
122791888 5272 Eudicot View MSA
122046631 5273 Angiosperm View MSA
121345075 5274 Embryophyte View MSA
123425275 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.08882 0.0 19.0921    
cufflinks 5.19203 0.0 14.2323    
cufflinks 8.94461 0.0 23.8915   High
cufflinks 4.79474 0.0 13.2189   Low
cufflinks 5.79664 0.0 15.7816    
cufflinks 6.76534 0.0 18.2499    
cufflinks 5.95015 0.0 16.1822    
cufflinks 4.99218 0.0 13.7179   Low
cufflinks 6.65164 0.0 17.9565    
cufflinks 1.679       Low
cufflinks 2.043        
cufflinks 2.78        
cufflinks 2.979       High
cufflinks 2.847       High
cufflinks 2.734        
cufflinks 2.24        
cufflinks 1.627       Low
cufflinks 2.302        
cufflinks 3.068       High
cufflinks 2.544        
cufflinks 1.998        
cufflinks 2.64        
cufflinks 2.358        
cufflinks 2.335        
cufflinks 2.282        
cufflinks 2.033        

0 Strain